DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP003666 and APC11

DIOPT Version :9

Sequence 1:XP_313450.5 Gene:AgaP_AGAP003666 / 1274343 VectorBaseID:AGAP003666 Length:863 Species:Anopheles gambiae
Sequence 2:NP_010276.3 Gene:APC11 / 851554 SGDID:S000002166 Length:165 Species:Saccharomyces cerevisiae


Alignment Length:66 Identity:20/66 - (30%)
Similarity:27/66 - (40%) Gaps:16/66 - (24%)


- Green bases have known domain annotations that are detailed below.


Mosquito   575 DDVCAIC---YQ----------DMTSAKITRCNHYFHGVCLRKWLYV---QDRCPLCHEIIMNQD 623
            :|||.||   |.          |.....|..|:|.||..|:.:||..   :..||:|.:....|.
Yeast    38 EDVCGICRASYNGTCPSCKFPGDQCPLVIGLCHHNFHDHCIYRWLDTPTSKGLCPMCRQTFQLQK 102

Mosquito   624 G 624
            |
Yeast   103 G 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP003666XP_313450.5 TRC8_N 9..547 CDD:290425
zf-rbx1 <575..616 CDD:289448 17/56 (30%)
zf-RING_2 576..616 CDD:290367 17/55 (31%)
APC11NP_010276.3 zf-ANAPC11 1..102 CDD:403920 18/63 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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