DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP003666 and RAD18

DIOPT Version :9

Sequence 1:XP_313450.5 Gene:AgaP_AGAP003666 / 1274343 VectorBaseID:AGAP003666 Length:863 Species:Anopheles gambiae
Sequence 2:NP_009992.1 Gene:RAD18 / 850430 SGDID:S000000662 Length:487 Species:Saccharomyces cerevisiae


Alignment Length:342 Identity:70/342 - (20%)
Similarity:118/342 - (34%) Gaps:92/342 - (26%)


- Green bases have known domain annotations that are detailed below.


Mosquito   558 HKISSLPEATTA---QLQQFDDV--CAICYQDMTSAKITRCNHYFHGVCLRKWLYVQDRCPLC-- 615
            |:|::..:.||.   .|.|.|.:  |.||...:....:|.|.|.|..:|:|..|..|..||||  
Yeast     3 HQITTASDFTTTSIPSLYQLDTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLF 67

Mosquito   616 -------------HEIIMNQDGNPGDESLEEQLNNGDNVRIEPRTGRPDPSADATNNRLQNVPQQ 667
                         .|||.:.      .||...|.  |.:||      |.|:....|..:.. |:.
Yeast    68 EFRESLLRSEFLVSEIIQSY------TSLRSSLL--DALRI------PKPTPVPENEEVPG-PEN 117

Mosquito   668 AAIVQGTDQADQPPAQPLFDDRYFEEQINNISRAASASRSMVGI---------------RAGQTD 717
            ::.::...:::........||.    ||...|....|.|||..|               |:.:..
Yeast   118 SSWIELISESESDSVNAADDDL----QIVATSERKLAKRSMTDILPLSSKPSKRNFAMFRSERIK 178

Mosquito   718 AQTDASKRAPHHP-----------EEQYRDEY----------GVTMRFGARENAHLYANNPAGIA 761
            .::..:::....|           |:.:.||.          .::..|....|.|..:::...:.
Yeast   179 KKSKPNEQMAQCPICQQFYPLKALEKTHLDECLTLQSLGKKPKISTTFPTESNPHNKSSSRFKVR 243

Mosquito   762 APQ--PSSGGTTGTVDGNYPSGSNSSDGSPSSSSSSSNTEDTGSMSSGSSASSSASGTLSGLSNS 824
            .|:  .||.|.|..|| .|.:...|::.......:.::...:......||...|.:||...:   
Yeast   244 TPEVDKSSCGETSHVD-KYLNSMMSAEHQRLPKINFTSMTQSQIKQKLSSLGLSTNGTRQNM--- 304

Mosquito   825 SLMSAAAISFNLRRRNH 841
                       ::|.||
Yeast   305 -----------IKRYNH 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP003666XP_313450.5 TRC8_N 9..547 CDD:290425
zf-rbx1 <575..616 CDD:289448 16/57 (28%)
zf-RING_2 576..616 CDD:290367 15/56 (27%)
RAD18NP_009992.1 RAD18 1..470 CDD:227719 70/342 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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