DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP003666 and Rnf139

DIOPT Version :9

Sequence 1:XP_313450.5 Gene:AgaP_AGAP003666 / 1274343 VectorBaseID:AGAP003666 Length:863 Species:Anopheles gambiae
Sequence 2:NP_780435.1 Gene:Rnf139 / 75841 MGIID:1923091 Length:668 Species:Mus musculus


Alignment Length:748 Identity:256/748 - (34%)
Similarity:379/748 - (50%) Gaps:164/748 - (21%)


- Green bases have known domain annotations that are detailed below.


Mosquito     3 VVRTKVLGLVDVIMRVPSLFIIDEILKIGMGVPIGQPAGQPANSSAINLDSPPVAAMLPDDDRGM 67
            :.:.:|...::|.:|||.|:|||.|.                ||                    .
Mouse    13 MAQQQVWAALEVALRVPCLYIIDAIF----------------NS--------------------Y 41

Mosquito    68 QDSIEVYKFVSLAVLKFLICLFGAISAACVFMLWTRHLVIVYMY----MVSVGLIFLSYWS---- 124
            .||.:....:.|.:   .:.|.|.:.::.|.:|..|.|...|||    :::...:.::|::    
Mouse    42 YDSSQSRFCIGLQI---FLRLLGIVVSSIVLILSQRSLFKFYMYSSAFLLAATSVLVNYYAALHI 103

Mosquito   125 ------NVSALSVISDSPSLLEDVLSLNMDRLLDPGGVLISILPH---------LLAQWLMGVIF 174
                  |.||..                           |.:||.         ::.|...|:  
Mouse   104 DFYGAYNTSAFG---------------------------IELLPRKGPSLWMALIVLQLTFGI-- 139

Mosquito   175 AYIHLGPRHKIVQKALPFSFLMPL--LLAMLPL---------PSLVLKHSPAFAAILPLVLSKIA 228
            .|:.|.....|..:.:..:.|:|:  |:..|||         .||:|    .|..:|.|.:....
Mouse   140 GYVTLLQIQSIYSQLMILNILVPIIGLITELPLHIRETVVLMSSLIL----IFNTVLVLAVKLKW 200

Mosquito   229 LWSSSFDVVKTILSGYQHARNFASNFGIATLIENEWQRLNVPCVLRVFWTIRLTEHLVSLL---- 289
            .:.|:..|       |...|:....:|:..|:|:.|:|:..|.:|||||..|:|.....|:    
Mouse   201 FYYSTRYV-------YLLVRHMYRIYGLQLLMEDTWKRIRFPDILRVFWLTRITAQATVLMYILR 258

Mosquito   290 MSSEAPLRFAA------TVQSVLVSGCETLTAVLGMTSIISLICHYIGKMFQLFLLSEDYDEDKS 348
            |::|....|.:      .:.::::|||::...||||:::||.|.||:|.....|:.|.: ::|:.
Mouse   259 MANETESFFISWDDFWDVICNLIISGCDSTLTVLGMSAVISSIAHYLGLGILAFIGSTE-EDDRR 322

Mosquito   349 IGTVSAILFYILALQTGLTSLSPDKRIVRLCRNMCLLVTALLHFLHNIVAPILMSLSAARNPSRK 413
            :|.|:.:||:||||||||:.|.|::|::||.||||||:||:|||:|.:..|:||||||:...|..
Mouse   323 LGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLLTAVLHFIHGMTDPVLMSLSASHVSSFH 387

Mosquito   414 RHARALIVCAFLLIAPGSLLAVLWASHSPSTWLLAVTAFSVEVIVKVLVSLATYTLFLLDARRQT 478
            ||...|.|.|.|.|.|..|..|||..::.:|||.|||||.||:.:||:|||..||||::|.....
Mouse   388 RHFPVLFVSACLFILPVLLSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTVYTLFMIDGYYNV 452

Mosquito   479 FWEKLDDYVYYIRAFGNSVEFCFGIFLFFNGAWILIFESEMIPIGGAIRALMMGIHAYFNIWCEA 543
            .|||||||||::|:.||.:||.||:.:|.|||:.::|||     |..|||.||.:||||||:.:.
Mouse   453 LWEKLDDYVYFVRSTGNIIEFIFGVVMFGNGAYTMMFES-----GSKIRACMMCLHAYFNIYLQV 512

Mosquito   544 RAGWVVFMKRRTAVHKISSLPEATTAQLQQFDDVCAICYQDM-TSAKITRCNHYFHGVCLRKWLY 607
            :.||..||.|||||.||:||||...:.||:.||||||||.:. |||:||.||||||.:|||||||
Mouse   513 KNGWKTFMNRRTAVKKINSLPEIKGSHLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 577

Mosquito   608 VQDRCPLCHE--------------------IIMNQDGNPGDESLEE-------QLNNGDNVRIEP 645
            :||.||:||:                    |..|::.|| :|:|.|       :||..|:     
Mouse   578 IQDTCPMCHQKVYIEDEIKDNSNASNNNGFIAPNENPNP-EEALREDAAGSDRELNEDDS----- 636

Mosquito   646 RTGRPDPSADATNNRLQNVPQQAAIVQGTDQAD 678
             |...|.:....|..:|:....||..:..|..|
Mouse   637 -TDCDDDAQRERNGGIQHTGAAAAAAEFNDDTD 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP003666XP_313450.5 TRC8_N 9..547 CDD:290425 188/581 (32%)
zf-rbx1 <575..616 CDD:289448 30/41 (73%)
zf-RING_2 576..616 CDD:290367 29/40 (73%)
Rnf139NP_780435.1 TRC8_N 19..516 CDD:290425 188/581 (32%)
zf-rbx1 <544..586 CDD:289448 30/41 (73%)
RING 547..589 CDD:238093 29/41 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..668 17/72 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 280 1.000 Domainoid score I1712
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5222
Inparanoid 1 1.050 389 1.000 Inparanoid score I2080
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D302551at33208
OrthoFinder 1 1.000 - - FOG0008390
OrthoInspector 1 1.000 - - oto197860
Panther 1 1.100 - - LDO PTHR22763
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6380
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.930

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