DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trc8 and Trc8

DIOPT Version :10

Sequence 1:XP_313450.6 Gene:Trc8 / 1274343 VectorBaseID:AGAMI1_007446 Length:862 Species:Anopheles gambiae
Sequence 2:NP_996303.1 Gene:Trc8 / 43476 FlyBaseID:FBgn0039668 Length:809 Species:Drosophila melanogaster


Alignment Length:875 Identity:463/875 - (52%)
Similarity:566/875 - (64%) Gaps:143/875 - (16%)


- Green bases have known domain annotations that are detailed below.


Mosquito     4 VRTKVLGLVDVIMRVPSLFIIDEILKIGMGV-----------------PIGQPA---GQPANSSA 48
            |||||||||||:||||.:.:||||||:.||:                 |...||   ||...:|.
  Fly     3 VRTKVLGLVDVMMRVPPVMVIDEILKMDMGMQSWLYPDKDKASGALATPTEAPAVPSGQDPFTSI 67

Mosquito    49 INLDSPPVAAMLPDDDRGMQDSIEVYK------------------------FVSLAVLKFLICLF 89
            ..|.|....:.....::.::.:.|..|                        .:|...:||::|:|
  Fly    68 KELFSHMTTSAQSVLEQSIEKASEAAKTHGMLSSGFNSLMNELSKDQTLADVLSTTTVKFVLCVF 132

Mosquito    90 GAISAACVFMLWTRHLVIVYMYMVSVGLIFLSYWSNVSALSVISDSPSLLEDVLSLNMDRLLDPG 154
            ..:||||:|||||||||:|||::.|:||.|||||||||||::...|||::||::|||..||||.|
  Fly   133 AFLSAACIFMLWTRHLVMVYMFLTSLGLTFLSYWSNVSALALTERSPSMVEDLMSLNTTRLLDSG 197

Mosquito   155 GVLISILPHLLAQWLMGVIFAYIHLGPRHKIVQKALPFSFLMPLLLAMLPLPSLVLKHSPAFAAI 219
            ||::|:.|||:|||.||::|||||||||.:.||:::|..|..|:||||||||:.|::|.|..|..
  Fly   198 GVVMSLAPHLMAQWFMGMLFAYIHLGPRFEHVQRSMPIIFASPILLAMLPLPAKVVQHLPVVAVF 262

Mosquito   220 LPLVLSKIALWSSSFDVVKTILSGYQHARNFASNFGIATLIENEWQRLNVPCVLRVFWTIRLTEH 284
            .|::|:||.|..|:.:..:|:.:|||:|.||.||||::.||||||||||||.||||||||||.:.
  Fly   263 TPIILTKITLMQSAMEASRTVYNGYQYAMNFVSNFGLSALIENEWQRLNVPNVLRVFWTIRLIQG 327

Mosquito   285 LVSLLMS-SEAPLRFAATVQSVLVSGCETLTAVLGMTSIISLICHYIGKMFQLFLLSEDYDEDKS 348
            ..:|..: |:.||......|.:||.||||:|||||||.:||:.|||||:.||.:||:.| ||:||
  Fly   328 GYALATTESDEPLDLMTATQKLLVDGCETMTAVLGMTGVISMFCHYIGRGFQWYLLTYD-DEEKS 391

Mosquito   349 IGTVSAILFYILALQTGLTSLSPDKRIVRLCRNMCLLVTALLHFLHNIVAPILMSLSAARNPSRK 413
            :|||||:|||||||||||||||||||.:|||||:|||:|||||||||||:|||||||||||||||
  Fly   392 LGTVSAVLFYILALQTGLTSLSPDKRFIRLCRNLCLLMTALLHFLHNIVSPILMSLSAARNPSRK 456

Mosquito   414 RHARALIVCAFLLIAPGSLLAVLWASHSPSTWLLAVTAFSVEVIVKVLVSLATYTLFLLDARRQT 478
            ||.|||.|||||::...|||..||:..|.||||||||||||||:||||||||||||||||||||.
  Fly   457 RHVRALSVCAFLVVLSVSLLYHLWSQQSISTWLLAVTAFSVEVVVKVLVSLATYTLFLLDARRQF 521

Mosquito   479 FWEKLDDYVYYIRAFGNSVEFCFGIFLFFNGAWILIFESEMIPIGGAIRALMMGIHAYFNIWCEA 543
            ||||||||:||:|||||||||||||.||.||||||||||.....||.|||:||.|||||||||||
  Fly   522 FWEKLDDYLYYVRAFGNSVEFCFGILLFINGAWILIFESAQNATGGGIRAIMMCIHAYFNIWCEA 586

Mosquito   544 RAGWVVFMKRRTAVHKISSLPEATTAQLQQFDDVCAICYQDMTSAKITRCNHYFHGVCLRKWLYV 608
            ||||.||||||:||||||:|||||.||||.||||||||||:|.|||||||.|:||||||||||||
  Fly   587 RAGWSVFMKRRSAVHKISALPEATPAQLQAFDDVCAICYQEMYSAKITRCRHFFHGVCLRKWLYV 651

Mosquito   609 QDRCPLCHEIIMNQDGNPGDESLEEQLNNGDNVRIEPRTGRPDPSADATNNRLQNVPQQAAIVQG 673
            ||||||||||:|..|  ..||:..|              ..|.|:|                   
  Fly   652 QDRCPLCHEIMMYTD--KADENAPE--------------AEPAPAA------------------- 681

Mosquito   674 TDQADQPPAQPLFDDRYFEEQINNISRAASASRSMVGIRAGQTDAQTDASKRAPHHPEEQYRDEY 738
              ||:||..      .|..:..||.:                  ||..:.:|||....||     
  Fly   682 --QAEQPMR------IYPRDDANNAA------------------AQRRSPERAPVEASEQ----- 715

Mosquito   739 GVTMRFGARENAHLYANNLAGIAAPQPSSGGATGTVDGNYPSGSNSSDGSPSSSSSSSNTEDTGS 803
                                   ||..||..|..|:      |:.:......|:::........|
  Fly   716 -----------------------APATSSSSAAATI------GAEAVSAIVESAAAVGEARSLVS 751

Mosquito   804 MSSGSSASSSASGTLSGLSNSSLMSAAAIS 833
            ::|.|||:...|.  ||.|:||.|:|:|.|
  Fly   752 VASSSSATHRISA--SGSSDSSYMTASAQS 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trc8XP_313450.6 None
Trc8NP_996303.1 TRC8_N 8..590 CDD:463960 386/626 (62%)
RING-H2_RNF139-like 619..659 CDD:438139 8/39 (21%)

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