DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP010356 and rnf150a

DIOPT Version :9

Sequence 1:XP_559104.3 Gene:AgaP_AGAP010356 / 1272683 VectorBaseID:AGAP010356 Length:361 Species:Anopheles gambiae
Sequence 2:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio


Alignment Length:302 Identity:120/302 - (39%)
Similarity:170/302 - (56%) Gaps:50/302 - (16%)


- Green bases have known domain annotations that are detailed below.


Mosquito    73 AYLNYSFTGPDGHLIEFG-SESAKYGEGRVLNRSGLLVHISNSANHS-------------DHTGC 123
            |::|.::..|....|:.. ||..:|||                  ||             |...|
Zfish    42 AFVNITYLDPVTSEIKTDRSECGRYGE------------------HSPKRDARGFVFMPQDRQAC 88

Mosquito   124 SKQWSGTLGGTIPERDAPWIALVRRGSCNFEDKVKHAYERGAAGIIIYN----DKNDT-KLEKMK 183
                .|.....:|....|||||:.:|:|.|.:|::||....|:.::|:|    :.||| .:....
Zfish    89 ----DGNTRFPLPHPSIPWIALIAKGNCTFREKIRHAAALNASAVVIFNVGSSNSNDTITMPHHG 149

Mosquito   184 INDKERNITAVFTTNAMGRELIEILEVHRSVVQMRIIEGSRQFRNLGNINRTSVLFVSISFIVLM 248
            ..|    :.|:......|||::.:||.:.:|. |.|..|:|..:..  ::||||:||||||||||
Zfish   150 TGD----VVAIMIPEPKGREIMALLEKNITVA-MHISIGTRNLQKY--VSRTSVVFVSISFIVLM 207

Mosquito   249 IISLVWLVFYYVQRFRYLQTKDKQSKRLCSVAKRIIAKIPTKSIKSDDKEIDNDC--CAICIEPY 311
            ||||.||||||:|||||...:|:..:||...||:.|:|:..::|:..|||.|:|.  ||:|||.|
Zfish   208 IISLAWLVFYYIQRFRYANARDRSQRRLGDAAKKAISKLQVRTIRKGDKETDSDFDNCAVCIEDY 272

Mosquito   312 KVTDVIRVLPCKHEFHKVCIDPWLLEHRTCPMCKMDILKHYG 353
            |..||:|:|||:|.||:.|:||||.:|||||||||:|||..|
Zfish   273 KPNDVVRILPCRHVFHRNCVDPWLQDHRTCPMCKMNILKALG 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP010356XP_559104.3 PA_GRAIL_like 76..219 CDD:239037 40/161 (25%)
zf-RING_2 302..345 CDD:290367 28/44 (64%)
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037 40/161 (25%)
UPF0233 <194..>219 CDD:299753 22/24 (92%)
zf-RING_2 263..306 CDD:290367 27/42 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BHU7
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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