DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNR2 and cnr2

DIOPT Version :9

Sequence 1:NP_001832.1 Gene:CNR2 / 1269 HGNCID:2160 Length:360 Species:Homo sapiens
Sequence 2:XP_002938788.2 Gene:cnr2 / 100498271 XenbaseID:XB-GENE-488004 Length:357 Species:Xenopus tropicalis


Alignment Length:347 Identity:177/347 - (51%)
Similarity:231/347 - (66%) Gaps:4/347 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEECWVTEIANGSKDGLDSNPMKDYMIL-SGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQL 64
            |.||......|.:|.|.....::.::|| |..||..:||||...|.|..|||..:|.:|.:|..|
 Frog     1 MSECGQGSSENATKCGTQVMDIQCFLILNSTSQKIFIAVLCIGAGALCILENTVILCMIWTSSHL 65

Human    65 RRKPSYLFIGSLAGADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTASVGSLLLTAI 129
            ||||||:|:.|||.||||||:||:.|||:||||||..:.||||.|:|.||.:||||:|||||.|.
 Frog    66 RRKPSYIFLMSLALADFLASMVFSYSFVDFHVFHGAGTHAVFLFKLGGVTASFTASLGSLLLMAF 130

Human   130 DRYLCLRYPPSYKALLTRGRALVTLGIMWVLSALVSYLPLMGWTCC--PRPCSELFPLIPNDYLL 192
            |||:.:..|..|||.:||.|||:.|..||:::..::|||||||.||  ...||||||||.|:||.
 Frog   131 DRYVSIHKPSMYKAKVTRKRALLALAGMWLITMFIAYLPLMGWNCCQLDTSCSELFPLISNNYLA 195

Human   193 SWLLFIAFLFSGIIYTYGHVLWKAHQHVASLSGHQDRQVPGMARMRLDVRLAKTLGLVLAVLLIC 257
            ||::.:..|.:.|||:|.|:|||||:|...:..|..:...|.||:|||:.|||||.|||.||:||
 Frog   196 SWIILVVVLLTLIIYSYAHILWKAHKHAVYMEQHNMQSGRGQARLRLDIMLAKTLALVLLVLVIC 260

Human   258 WFPVLALMAHSLATTLSDQVKKAFAFCSMLCLINSMVNPVIYALRSGEIRSSAHHCLAHWKKCVR 322
            |.|||.||.|||..:|...:|..|||||.|||:||||||:|||.||.|:.........:.|:.:|
 Frog   261 WSPVLILMMHSLLFSLDRSIKTIFAFCSTLCLVNSMVNPMIYAWRSRELHRKLIKGFQNIKQLLR 325

Human   323 GLGSEAKEE-APRSSVTETEAD 343
            ..|::.:|| |.::|..:|..|
 Frog   326 VTGTDPEEEGAQKNSGLDTVGD 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNR2NP_001832.1 7tmA_CB2 34..310 CDD:320463 157/277 (57%)
TM helix 1 36..60 CDD:320463 11/23 (48%)
TM helix 2 70..91 CDD:320463 13/20 (65%)
TM helix 3 107..129 CDD:320463 14/21 (67%)
TM helix 4 152..168 CDD:320463 4/15 (27%)
TM helix 5 187..210 CDD:320463 9/22 (41%)
TM helix 6 244..266 CDD:320463 16/21 (76%)
TM helix 7 278..303 CDD:320463 18/24 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..360 6/18 (33%)
cnr2XP_002938788.2 7tmA_CB2 35..313 CDD:320463 157/277 (57%)
TM helix 1 37..61 CDD:320463 11/23 (48%)
TM helix 2 71..92 CDD:320463 13/20 (65%)
TM helix 3 108..130 CDD:320463 14/21 (67%)
TM helix 4 153..169 CDD:320463 4/15 (27%)
TM helix 5 190..213 CDD:320463 9/22 (41%)
TM helix 6 247..269 CDD:320463 16/21 (76%)
TM helix 7 281..306 CDD:320463 18/24 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 301 1.000 Domainoid score I9248
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1389
Inparanoid 1 1.050 336 1.000 Inparanoid score I10065
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43095
OrthoDB 1 1.010 - - D179139at32523
OrthoFinder 1 1.000 - - FOG0011446
OrthoInspector 1 1.000 - - oto158874
Panther 1 1.100 - - LDO PTHR22750
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R12411
SonicParanoid 1 1.000 - - X11502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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