back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ovgp1 and Idgf6

DIOPT Version :9

Sequence 1:	NP_031722.1	Gene:	Ovgp1 / 12659	MGIID:	106661	Length:	721	Species:	Mus musculus
Sequence 2:	NP_001286499.1	Gene:	Idgf6 / 36868	FlyBaseID:	FBgn0013763	Length:	452	Species:	Drosophila melanogaster

Alignment Length:	433	Identity:	105/433 - (24%)
Similarity:	188/433 - (43%)	Gaps:	95/433 - (21%)

- Green bases have known domain annotations that are detailed below.

Mouse    24 LVCYFTNWAHSRPGPASIMPHDLDPFL--CTHLIFAFASMSNNQIVAKNLQDE------NVLYPE 80
            ||||:.:.:..:.|...::..:|:|.|  |.:|::.:|.:..:...|.:|..:      ..||..
  Fly    31 LVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQLDLDLGKGLYRT 95

Mouse    81 FNKLKERNRELKTLLSIGG---------WNFGTSRFTAMLSTLANREKFIDSVISFLRIHGFDGL 136
            ..:||.:...:|.|||:||         .....:::..:|.:...|.:|:::|.|.::.:|||||
  Fly    96 VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFDGL 160

Mouse   137 DLFFLYPGLRGSPPH----DRW----------------------NFLFLIEELQFAFEREALLTQ 175
            |:.:.:|..:....|    ..|                      .|..|:.:::.||..:
  Fly   161 DVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFRPD----- 220

Mouse   176 HPRLLLSAAVSGIPSIIHTS--YDALLLGRRLDFINVLSYDLHGSWEKFT--------GHNSPLF 230
              .||||..|  :|: :::|  ||...:...|||:|:      |:::.||        .:.:|::
  Fly   221 --NLLLSTTV--LPN-VNSSLFYDIPAVVNYLDFVNL------GTFDFFTPQRNPEVADYAAPIY 274

Mouse   231 SLPEDSK--SSAYAMNYWRKLGTPADKLIMGFPTYGRNFYLLKES-KNGLQTAS--MGPASPGKY 290
            .|.|.:.  :.|..:.||.:...||.|:.:|..||||.:.|..:| ..|:....  ...|..|..
  Fly   275 ELSERNPEFNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDSGDTGVPPVKDVKDEAPVGGN 339

Mouse   291 TKQAGFLAYYEVCSF------------------VQRAKKHWIDYQYVPYAFKGKE--WLGYDDTI 335
            |:..|..::.|||:.                  ||...|.:..|.|.....||..  |:.::|..
  Fly   340 TQVPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDPD 404

Mouse   336 SFSYKAMYVKREHFGGAMVWTLDMDDVRGTFCGNGPFPLVHIL 378
            :.:.||.||:.|:.||..::.|..||.|| .|.|..:|::..:
  Fly   405 TAADKAGYVRTENLGGVALFDLSYDDFRG-LCTNEKYPILRAI 446

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.