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Protein Alignment Chil3 and Idgf5

DIOPT Version :9

Sequence 1:	NP_034022.2	Gene:	Chil3 / 12655	MGIID:	1330860	Length:	398	Species:	Mus musculus
Sequence 2:	NP_611321.3	Gene:	Idgf5 / 37104	FlyBaseID:	FBgn0064237	Length:	444	Species:	Drosophila melanogaster

Alignment Length:	461	Identity:	124/461 - (26%)
Similarity:	204/461 - (44%)	Gaps:	111/461 - (24%)

- Green bases have known domain annotations that are detailed below.

Mouse     4 LILVTGLAILLNVQLGSSY----QLMCYY--TSWAKDRPIEGSFKPGNIDPCL--CTHLIYAFAG 60
            |:|.:.||.     ..|:|    :|:|:|  .|:.::.|.:.|.  ..::|.|  |..|:|.:||
  Fly    12 LLLCSFLAF-----FQSTYAEVGKLVCFYDAQSFVREGPAQMSL--AELEPALQFCNFLVYGYAG 69

Mouse    61 MQNNEITY-------THEQDLRDYEALNGLKDKNTELKTLLAIGGWK----FGPA---PFSAMVS 111
            :  :.:||       :...|.:.|..:..|:.|...::.||::||.:    .|.|   .:..::.
  Fly    70 I--DAVTYKIKSLDPSLTNDRQHYRHITALRKKYPHVRFLLSVGGDRDVNSEGVADSDKYLRLLE 132

Mouse   112 TPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEK--- 173
            ..::|:.|..||:..|....|||::|.||:|.:|  |...:.:|..:...:|..|...||::
  Fly   133 QSEHRKSFQASVLAELNNNGFDGIDLAWQFPKNR--PKLQQGVFKRVWGSLRGWFSSSSVDEKSE 195

Mouse   174 ---------------DIPR---LLLTS-----TGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLH 215
                           |:.|   ||..|     :....|||       |::..::|::.:.|||..
  Fly   196 EHREQFATLLEELQSDLRRGGQLLTVSMLPHVSAELFIDV-------PKVLSNVDFVNLGTYDFQ 253

Mouse   216 DP-KDGYTGE-NSPLYKSPYDIGKSADLNVDSIISYWKDHGA--ASEKLIVGFPAYGHTFILSDP 276
            .| :|....: .:||| :.||  :....||...:.||.:..:  :..||.||..:||..:.::
  Fly   254 TPERDPKVADLPTPLY-AMYD--RDPSHNVQYQVQYWMNQTSEISVHKLHVGVTSYGRAWNMT-- 313

Mouse   277 SKTGI-GAPTI----STGPPGKYTDESGLLAYYEVCTFLNEGATEVWDAPQ--EVP--------- 325
            ..:|| |.|.|    ...|||:.|...|||::.|:|..|.:       .||  |||
  Fly   314 RNSGITGYPPIPAANGAAPPGRQTVTPGLLSWPEICDLLQQ-------QPQDREVPHLRKVGDPT 371

Mouse   326 -----YAY-----QGNE--WVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFP 378
                 |||     ||..  ||||::..:..:||.::....|||.....|.||||.|. |....||
  Fly   372 KRFGIYAYRAADDQGENGLWVGYEDPLTAAIKAGFVHAQGLGGVAFHDLSMDDFRGQ-CAGEKFP 435

Mouse   379 LTSTLK 384
            :..::|
  Fly   436 ILRSIK 441

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.