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Protein Alignment Chil3 and Idgf6

DIOPT Version :9

Sequence 1:	NP_034022.2	Gene:	Chil3 / 12655	MGIID:	1330860	Length:	398	Species:	Mus musculus
Sequence 2:	NP_001286499.1	Gene:	Idgf6 / 36868	FlyBaseID:	FBgn0013763	Length:	452	Species:	Drosophila melanogaster

Alignment Length:	469	Identity:	114/469 - (24%)
Similarity:	204/469 - (43%)	Gaps:	111/469 - (23%)

- Green bases have known domain annotations that are detailed below.

Mouse     5 ILVTGLAI----LLNVQLGS-------SYQLMCYYTSWAKDRPIEGSFKPGNIDPCL--CTHLIY 56
            :::..|||    |.::|...       ...|:|||.|.:..:...|......::|.|  |.:|:|
  Fly     1 MIIKALAIVSLCLASIQASKVGAPQLPKKHLVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVY 65

Mouse    57 AFAGMQNNE---ITYTHEQDLRD-----YEALNGLKDKNTELKTLLAIGG---------WKFGPA 104
            .:||::.:.   ::...:.|| |     |..:..||.|...:|.||::||         .|..|.
  Fly    66 GYAGIERDSHKAVSLNQQLDL-DLGKGLYRTVTRLKRKYPNVKILLSVGGDKDIELDKDAKELPN 129

Mouse   105 PFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPK------------------- 150
            .:..::.:|..|..|:.:|...::.|.||||::.||:|  :..|.|
  Fly   130 KYLELLESPTGRTRFVNTVYSLVKTYGFDGLDVAWQFP--KNKPKKVHSGIGSLWKGFKKVFSGD 192

Mouse   151 ---------DKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDVIKSG--YKIPELSQSL 204
                     .|..|:.|:::::.||..::       |||::|   ::..:.|.  |.||.:...|
  Fly   193 SIVDEKSEEHKEQFTALLRDVKNAFRPDN-------LLLSTT---VLPNVNSSLFYDIPAVVNYL 247

Mouse   205 DYIQVMTYDLHDPKDGYTGENSPL---YKSP-YDIG-KSADLNVDSIISYWKDHGAASEKLIVGF 264
            |::.:.|:|.      :|.:.:|.   |.:| |::. ::.:.||.:.:.||..:...:.|:.||.
  Fly   248 DFVNLGTFDF------FTPQRNPEVADYAAPIYELSERNPEFNVAAQVKYWLRNNCPASKINVGV 306

Mouse   265 PAYGHTFILSDPS-KTGIGAPTI----STGPPGKYTDESGLLAYYEVCTFL-----------NEG 313
            ..||..:.|:|.| .||:  |.:    ...|.|..|...|:.::.|||..|           |..
  Fly   307 ATYGRPWKLTDDSGDTGV--PPVKDVKDEAPVGGNTQVPGIYSWPEVCALLPNQNNAYLKGANAP 369

Mouse   314 ATEVWD-APQEVPYAYQGNE-------WVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGS 370
            ..:|.| |.:...|||:..:       ||.:::..:...||.:::..||||..::.|..|||.|
  Fly   370 LIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDPDTAADKAGYVRTENLGGVALFDLSYDDFRG- 433

Mouse   371 FCHQRHFPLTSTLK 384
            .|....:|:...:|
  Fly   434 LCTNEKYPILRAIK 447

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.