Sequence 1: | NP_066388.1 | Gene: | Cftr / 12638 | MGIID: | 88388 | Length: | 1476 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723772.2 | Gene: | MRP / 34686 | FlyBaseID: | FBgn0032456 | Length: | 1549 | Species: | Drosophila melanogaster |
Alignment Length: | 1492 | Identity: | 386/1492 - (25%) |
---|---|---|---|
Similarity: | 678/1492 - (45%) | Gaps: | 240/1492 - (16%) |
- Green bases have known domain annotations that are detailed below.
Mouse 5 PLEKASFISKLFFSWTTPILRKGYRHHLELSDIYQAPSADSADHLSEKLEREWDRE--------- 60
Mouse 61 -----------QASKKNP------------QLIHALRRCFFWRFLFYGILLYLGEVTKAVQPVLL 102
Mouse 103 GRIIASYDPENKVERSIAIYLGIGLCLLFIVRTLLLHPAIFGLHRIGMQMRTAMFSLIYKKTLKL 167
Mouse 168 SSRVLDKISIGQLVSLLSNNLNKFDEGLALAHFIWIAPLQVTLLMGLLWDLLQFSAFCGLGLLII 232
Mouse 233 LVIFQAILGKMMVKYRDQRAAKINERLVITSEIIDNIYSVKAYCWESAMEKMIENLREVELKMTR 297
Mouse 298 KAAYMRFFTSSAFFFSGFFVVFLSVLPYTV---INGIVLRKIFTTISFCIVLRMSVTRQFPTAVQ 359
Mouse 360 IWYDSFGMIRKIQDFLQKQEYKVLEYNLMTTGIIMENVTAFWEEGFGELLEKVQQSNGDRKHSSD 424
Mouse 425 ENNVSFSHLCLVGNPV-LKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRV 488
Mouse 489 SFCSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQR 553
Mouse 554 ARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCK--LMANKTRILVTSKMEHLRKADKI 616
Mouse 617 LILHQGSSYFYGTFSELQSLRPDFSSKLMGYDTFDQFTEERRSSILTETLRRFSVDDSSAPWSKP 681
Mouse 682 KQSFRQTGEVGEKRKNSILNSFSSVRKISIVQKTPLCIDGESDDLQEKRLSLVPDSEQGEAALPR 746
Mouse 747 SNMIATGPTFPGRRRQSVLDLMTFTP-----NSGSSNLQRTRTSIRKISLVPQISLNEVDVYSRR 806
Mouse 807 LSQDSTLNITEEINEEDLKECFLDDVIKIPPVTTWNTYLRYFTLHK------GLLLVLIWCVLVF 865
Mouse 866 LVEVAASLFVLWLLK-NNPVNSGNN-GTKISNSSYVVIITSTSF-------YYIFYIYVGVADTL 921
Mouse 922 LALSLFRGLPLVHTLITASKILHRKMLHSILHAPMSTISKL-KAGGILNRFSKDIAILDDFLPLT 985
Mouse 986 IFDFIQLVFIVIGAIIVVSALQPYIFLAT-VPGLVVFILLRAYFLHTAQQLKQLESEGRSPIFTH 1049
Mouse 1050 LVTSLKGLWTLRAFR-RQTYFETLFHKALNLHTANWFMYLATLRWFQMRIDMIFVLFFIVVTFIS 1113
Mouse 1114 ILTTGEGEGTAGIILTLAMNIMSTLQWAVNSSIDTDSLMRSVSRVFKFIDIQTEESMYTQIIKEL 1178
Mouse 1179 PREGSSDVLVIKNEHVKKSDIWPSGGEMVVKDLTVKYMDDGNAVLENISFSISPGQRVGLLGRTG 1243
Mouse 1244 SGKSTLLSAFLRMLNIKGD-IEIDGVSWNSVTLQEWRKAFGVITQKVFIFSGTFRQNLDPNGKWK 1307
Mouse 1308 DEEIWKVADEVGLKSVIEQFPGQLNFTLVDGGYVLSHGHKQLMCLARSVLSKAKIILLDEPSAHL 1372
Mouse 1373 DPITYQVIRRVLKQAFAGCTVILCEHRIEAMLDCQRFLVIEESNVWQYDSLQALL-SEKSIF 1433 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cftr | NP_066388.1 | CFTR_protein | 1..1464 | CDD:273530 | 386/1492 (26%) |
ABC_membrane | 85..303 | CDD:294371 | 56/217 (26%) | ||
ABCC_CFTR1 | 389..670 | CDD:213258 | 88/283 (31%) | ||
CFTR_R | 639..844 | CDD:291094 | 26/209 (12%) | ||
Disordered R region. /evidence=ECO:0000250|UniProtKB:P13569 | 654..826 | 25/176 (14%) | |||
ABC_membrane | 861..1142 | CDD:279056 | 72/292 (25%) | ||
ABCC_CFTR2 | 1204..1464 | CDD:213256 | 86/232 (37%) | ||
Interaction with GORASP2. /evidence=ECO:0000250|UniProtKB:P13569 | 1382..1476 | 15/53 (28%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1446..1476 | ||||
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P13569 | 1474..1476 | ||||
MRP | NP_723772.2 | MRP_assoc_pro | 14..1548 | CDD:188098 | 386/1492 (26%) |
ABC_membrane | 338..601 | CDD:279056 | 64/262 (24%) | ||
ABCC_MRP_domain1 | 649..848 | CDD:213217 | 81/202 (40%) | ||
ABC_membrane | 988..1260 | CDD:279056 | 70/295 (24%) | ||
ABCC_MRP_domain2 | 1308..1528 | CDD:213211 | 80/219 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167841708 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0054 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D138195at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |