DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR1I1 and ser-7

DIOPT Version :9

Sequence 1:NP_001004713.1 Gene:OR1I1 / 126370 HGNCID:8207 Length:355 Species:Homo sapiens
Sequence 2:NP_741730.1 Gene:ser-7 / 180565 WormBaseID:WBGene00004780 Length:435 Species:Caenorhabditis elegans


Alignment Length:141 Identity:35/141 - (24%)
Similarity:61/141 - (43%) Gaps:14/141 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    24 QTLLFTMFLSTYLVTIIGNALIILAIITDSHLHTPMYFFLFNLSLVDTLLSSTTVPKMLANIQAQ 88
            :.||....|:..::|.:||||:.||::....|..|..|.|.:|::.|..:....:|  ||.|...
 Worm    41 KALLAIAILAMIIMTTVGNALVCLAVLLVRKLKHPQNFLLVSLAVADFFVGLVVMP--LALIDLL 103

Human    89 SRAIPFVGCLTQMYAFHLFGTMDSFL-------LAVMAIDRFVAIVHPQRYLVLMCSPVCGLLLG 146
            ....|....:..:|.     |.|..|       |..:::||::.|..|.||.....:....:.:.
 Worm   104 FDKWPLGSTMCSVYT-----TSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIA 163

Human   147 ASWMITNLQSL 157
            ..|:|..:.|:
 Worm   164 CVWIIAAIVSI 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR1I1NP_001004713.1 7tm_4 31..305 CDD:304433 33/134 (25%)
7tm_1 41..290 CDD:278431 31/124 (25%)
ser-7NP_741730.1 7tmA_5-HT7 42..382 CDD:320452 35/140 (25%)
TM helix 1 44..68 CDD:320452 9/23 (39%)
TM helix 2 77..99 CDD:320452 6/23 (26%)
TM helix 3 115..137 CDD:320452 5/26 (19%)
TM helix 4 160..176 CDD:320452 3/15 (20%)
TM helix 5 201..224 CDD:320452
TM helix 6 315..340 CDD:320452
TM helix 7 350..375 CDD:320452
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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