DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cflar and Strica

DIOPT Version :9

Sequence 1:NP_001276633.1 Gene:Cflar / 12633 MGIID:1336166 Length:481 Species:Mus musculus
Sequence 2:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster


Alignment Length:435 Identity:83/435 - (19%)
Similarity:153/435 - (35%) Gaps:162/435 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse   148 LIASDQLNLLEKCLKNI------HRIDL------------------------------------- 169
            |:.::|..:.:|..:.:      ||:||                                     
  Fly   145 LVKTEQTTVTQKNGRTVTQHLETHRVDLKGSRPKATWASFASTANSSTSSYVSPYRQKPSMAITC 209

Mouse   170 ---NTKIQKYTQSSQGAR--------------SNMNTLQASLPKLSIK----------YNSRLQN 207
               |.|..|.|.|:..:.              |:::::..|.||...|          :.|...:
  Fly   210 TSPNIKTPKTTSSTSSSSASSITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSS 274

Mouse   208 GRSKEPR---FVEYRDSQRT-----------LVKTSIQESGAFLPPHIR---EETYRMQSKPLGI 255
            |.:| |:   ..:.:|:|.|           |.|..::.:..::..|.|   :..:|..|     
  Fly   275 GGTK-PKVTAVAQSQDAQGTISTSLGISKSSLTKNKLKPARVYIFNHERFDNKNEFRKGS----- 333

Mouse   256 CLIIDCIGNDTKYLQETFTSLGYHIQLFLFPKSHDITQI-VRRYASMAQHQDY-DSFACVLVSLG 318
                   ..|.|.|:.||..|...:::..     |.|.: :::...|.|.:|: |..|.|||.|.
  Fly   334 -------AQDVKVLRATFEQLKCKVEVIT-----DATLVTIKKTVRMLQTKDFEDKSALVLVILS 386

Mouse   319 -GSQSMMGRDQV---HSGFSLDH------VKNMFTGDTCPSLRGKPKLFFIQNYE---SLGSQLE 370
             |::    .||:   ...:|||.      ::|.       :|:.||||.|:|..:   .||..:.
  Fly   387 HGTR----HDQIAAKDDDYSLDDDVVFPILRNR-------TLKDKPKLIFVQACKGDCQLGGFMT 440

Mouse   371 DSSLEVDGPSIKNVDSKPLQPRHCTTHPEADIFWSLCTADVSHLEKPSSSSSVYLQKLSQQLKQG 435
            |::         ..:..|.:...|.:..|.  |.|..|.|          .:.::|.|.:.|.:.
  Fly   441 DAA---------QPNGSPNEILKCYSTYEG--FVSFRTED----------GTPFIQTLCEALNRS 484

Mouse   436 RRRPLVD---LHVELMDKVYAWNSGVSSKEKYSLSLQHTLRKKLI 477
            .:...:|   ::|..:.|       :.||::...|:..||..|.:
  Fly   485 GKTSDIDTIMMNVRQVVK-------MQSKDRQIPSVTSTLTSKYV 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CflarNP_001276633.1 Interaction with CASP8 propeptide. /evidence=ECO:0000250|UniProtKB:O15519 6..307 40/246 (16%)
Interaction with FADD. /evidence=ECO:0000250|UniProtKB:O15519 6..229 26/164 (16%)
Interaction with CASP8. /evidence=ECO:0000250|UniProtKB:O15519 6..200 16/111 (14%)
DED_c-FLIP_r1 6..85 CDD:260044
DED_c-FLIP_r2 96..176 CDD:260046 9/73 (12%)
Interaction with TRAF1 and TRAF2. /evidence=ECO:0000250|UniProtKB:O15519 197..481 67/326 (21%)
Interaction with CASP3. /evidence=ECO:0000250|UniProtKB:O15519 197..436 58/280 (21%)
Interaction with CASP8 subunits p18 and p10. /evidence=ECO:0000250|UniProtKB:O15519 219..481 62/291 (21%)
CASc 246..480 CDD:214521 55/250 (22%)
Caspase 265..360 30/106 (28%)
Interaction with CASP8. /evidence=ECO:0000250|UniProtKB:O15519 372..481 19/109 (17%)
StricaNP_001260718.1 CASc 311..523 CDD:294037 57/268 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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