DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cenpa and cid

DIOPT Version :10

Sequence 1:NP_001408377.1 Gene:Cenpa / 12615 MGIID:88375 Length:146 Species:Mus musculus
Sequence 2:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster


Alignment Length:145 Identity:50/145 - (34%)
Similarity:67/145 - (46%) Gaps:22/145 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 RKPQTPRRRPSSPAPGPSRQSSSVGLRIERRALCVQGSQTLRR-------RQKFMWLKEIKTLQK 62
            |.|||  ||.:......:|.:..|..:          :||.||       |.|.| .:||:.||.
  Fly    91 RSPQT--RRMTVQQESKTRAAGPVAAQ----------NQTRRRKAANPMSRAKRM-DREIRRLQH 142

Mouse    63 STDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTL 127
            ....|..|.|||.:|||...|:|..........||||:||:.|.:|.....|:|:|:.|..||||
  Fly   143 HPGTLIPKLPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVTL 207

Mouse   128 FPKDIQLTRRI--RG 140
            ..:|:.|...|  ||
  Fly   208 EVRDMALMAYICDRG 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenpaNP_001408377.1 H3 41..143 CDD:128705 42/109 (39%)
cidNP_523730.2 HFD_SF 126..219 CDD:480273 35/93 (38%)

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