DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT1C and ChAT

DIOPT Version :10

Sequence 1:NP_001365411.1 Gene:CPT1C / 126129 HGNCID:18540 Length:825 Species:Homo sapiens
Sequence 2:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster


Alignment Length:742 Identity:198/742 - (26%)
Similarity:312/742 - (42%) Gaps:143/742 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   120 FTLHVALRLLLSYHGWLLEPHGAMSSPTKTWLALVRIFSGRHPMLFSYQRSLPRQPVPSVQDTVR 184
            |..|....:..|..||   ....:|.| |.||:.......     |.:..:||:.|||::.:|:.
  Fly    46 FLTHRLSNITPSDTGW---KDSILSIP-KKWLSTAESVDE-----FGFPDTLPKVPVPALDETMA 101

Human   185 KYLESVRPILSDEDFDWTAVLAQEFLRLQ--ASLLQWYLRLKSWWASNYVSDWWEEFVYLRSRNP 247
            .|:.::.||.:....:.|..|.::|...|  .:.|..||..|.....|:...:|...:|:..|.|
  Fly   102 DYIRALEPITTPAQLERTKELIRQFSAPQGIGARLHQYLLDKREAEDNWAYYYWLNEMYMDIRIP 166

Human   248 LMVNSNYYM------------MAARAGNAVHALLLYRHRLNRQEIPPVRGPQWVRDGGVVLWPLG 300
            |.:|||..|            :|..|...:..:|.:|..|:..|:|..|.....::         
  Fly   167 LPINSNPGMVFPPRRFKTVHDVAHFAARLLDGILSHREMLDSGELPLERAASREKN--------- 222

Human   301 HVGPGRQLTAHGFLQTLLMGMRPLCSAQYEKIFNTTRIPGVQKD--YI---RHLHD-SQHVAVFH 359
                                 :|||.|||.::..:.|.|||::|  ::   ..|:| .:||.|..
  Fly   223 ---------------------QPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVIC 266

Human   360 RGRFFRMGTH-SRNSLLSPRALEQQFQRILDDPSPACPHEE-HLAALTAAPRGTWAQVRTSLKTQ 422
            |.:.:.:... |....||...:..|...:|.| :|..|.:. .:..|||.||.|||:.|..|:..
  Fly   267 RNQMYCVVLQASDRGKLSESEIASQILYVLSD-APCLPAKPVPVGLLTAEPRSTWARDREMLQED 330

Human   423 AAEA--LEAVEGAAFFVSLDAEP-------AGLTREDP----AASLDA--YAHALLAGRGHD--- 469
            ....  ||.:|.|...:.|| ||       .|.|...|    |...|.  .||.::.|.|.:   
  Fly   331 ERNQRNLELIETAQVVLCLD-EPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNS 394

Human   470 --RWFDKSFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPT-- 530
              |||||:..||:.::|..||..|||.::            .....||........:.|||..  
  Fly   395 GNRWFDKTMQLIICTDGTWGLCYEHSCSE------------GIAVVQLLEKIYKKIEEHPDEDNG 447

Human   531 -----LPQPQRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQ 590
                 ||.|:||:|.:..|:....:.|.:......:::|.:|..:..:||:||:.|.:|.|.:||
  Fly   448 LPQHHLPPPERLEWHVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQ 512

Human   591 IALQLAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAM--------------EDK 641
            :||||||::..|:...|||||.||.||.||.:.:|:.:.||..:.:||              ||:
  Fly   513 LALQLAHYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDE 577

Human   642 EK---------TDPQCLALFRVAVDKHQALLKAAMSGQGVDRHLFAL----YIVSRFLHLQSPFL 693
            |:         :......|||.||.:...::...:.|.|:|..|..|    ..|:..:|......
  Fly   578 EESRKVKFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDE 642

Human   694 TQVHSEQWQLSTSQIPVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSK 758
            :.:.|:.:.|||||:...             ..|..|:||....|||.||....: .|.|.:|:.
  Fly   643 SYIISQCFLLSTSQVACS-------------TDSFMGYGPVTPRGYGCSYNPHPE-QIVFCVSAF 693

Human   759 KSSTKTDSHRLGQHIEDALLDVASLFQ 785
            .|...|.:.|..:.::|:|..:..|.|
  Fly   694 YSCEDTSASRYAKSLQDSLDIMRDLLQ 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT1CNP_001365411.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..775 CDD:459926 181/676 (27%)
ChATNP_477004.5 Carn_acyltransf 92..710 CDD:459926 181/675 (27%)
Blue background indicates that the domain is not in the aligned region.

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