DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT1C and whd

DIOPT Version :10

Sequence 1:NP_001365411.1 Gene:CPT1C / 126129 HGNCID:18540 Length:825 Species:Homo sapiens
Sequence 2:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster


Alignment Length:821 Identity:342/821 - (41%)
Similarity:478/821 - (58%) Gaps:84/821 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLSRFWNDFLTGVFPASPLSWLFL 65
            |||||.||.|..::|.:|.::.....||..::.||:||||:.|:|..|....||:||. :..|:|
  Fly     1 MAEAHAAVAFSFAITHEGFDINYDHEVLNLVWNSGVRSWKKRLARARNGVRNGVYPAH-IQSLWL 64

Human    66 FSAIQLA-WFLQLDPSLGLMEKIKELLP----DWGGQHHGLRGVLAAALFASCLWGALIFTLHVA 125
            .|||.|. .|........|..:|...||    :|        .|.|..|.|..:|.::.||:...
  Fly    65 ISAIALGLHFAGYQAPFNLTNRILVHLPSNTINW--------QVTACFLAALVVWLSICFTMRYT 121

Human   126 LRLLLSYHGWLLE---PHGAMSSPTKTWLALVRIFSG-RHPMLFSYQRSLPRQPVPSVQDTVRKY 186
            |:|||.|.||:.|   |...:|.||..|:|:||:.|. ..|.|:|:|.||||.|:|||:||:.:|
  Fly   122 LKLLLMYKGWMYESRAPGSRVSLPTMLWVAVVRVLSSWNKPGLYSFQGSLPRLPLPSVKDTMTRY 186

Human   187 LESVRPILSDEDFDWTAVLAQEFLRLQASLLQWYLRLKSWWASNYVSDWWEEFVYLRSRNPLMVN 251
            |.||||:|.||::.....||:||.:.....|||||.|||||::|||||||||:||||.|:||.||
  Fly   187 LRSVRPLLDDENYTRMERLAKEFEQTIGKKLQWYLILKSWWSTNYVSDWWEEYVYLRGRSPLCVN 251

Human   252 SNYY-----------MMAARAGNAVHALLLYRHRLNRQEIPPVRGPQWVRDGGVVLWPLGHVGPG 305
            ||:|           ..||||.|.:..||.:|..:..||:.|:                      
  Fly   252 SNFYGTDAIFMNLTDKQAARAANVISLLLNFRRLIEHQELQPI---------------------- 294

Human   306 RQLTAHGFLQTLLMGMRPLCSAQYEKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHS 370
                       ::.||.||||.|||:.|||.|:||::.|.|.|..||.|:.|.|:|.:::|..:.
  Fly   295 -----------MVQGMIPLCSWQYERTFNTARVPGLETDRIIHYRDSNHIVVLHKGCYYKMLIYY 348

Human   371 RNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR----------TSLKTQAAE 425
            :..:|.|..|:.|.:.||...:.....|||||||||..|..||:.|          |||:|    
  Fly   349 KGRILRPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARNTFFSWGVNQTSLRT---- 409

Human   426 ALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSNGKLGLSV 490
                :|.|||.:|||.||.......|.. ||.:...||.|.|::|||||.||:.|.:||::|.:.
  Fly   410 ----IESAAFVLSLDDEPFEFDLARPEL-LDNFGKKLLHGNGYNRWFDKCFTVCVGTNGRVGFNA 469

Human   491 EHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQPQRLQWDLPDQIHSSISLALRG 555
            ||:|:|..|:.||||..:..:....||...|:.||.|....|.|.||.|||...:.......:..
  Fly   470 EHTWSDAAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTPTRLTWDLKPCLAQIEEATIDV 534

Human   556 AKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQLAHFRDRGQFCLTYESAMTRLFLEGR 620
            .|:::| |:..::....:||.|:::|.:|.|::||:|||||::||.|:|.||||::|||||.|||
  Fly   535 TKLINE-VNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLTYEASMTRLFREGR 598

Human   621 TETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQALLKAAMSGQGVDRHLFALYIVSRF 685
            |||||.||.|:..:|:||::...|:.:.:.:.:.|.|:||...:.||.|:|:|||||.||:||::
  Fly   599 TETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGIDRHLFCLYVVSKY 663

Human   686 LHLQSPFLTQVHSEQWQLSTSQIPVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGM 750
            |.:.||||.:|.||.|:|||||.|..|....|:..:|:.:|:||||||..|.|||||||..|:.:
  Fly   664 LEVDSPFLNEVLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGFGPVADDGYGVSYIIAGENL 728

Human   751 ITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQAGQHFK 791
            |.||||:|.:..:||.||..|:|..||.|:.|:|:  ||.|
  Fly   729 IFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFE--QHMK 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT1CNP_001365411.1 CPT_N 1..47 CDD:465132 20/45 (44%)
Carn_acyltransf 174..775 CDD:459926 265/621 (43%)
whdNP_001163111.1 CPT_N 1..47 CDD:465132 20/45 (44%)
Carn_acyltransf 174..753 CDD:459926 265/621 (43%)

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