DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CNGA3 and cnga3

DIOPT Version :9

Sequence 1:XP_011508856.1 Gene:CNGA3 / 1261 HGNCID:2150 Length:749 Species:Homo sapiens
Sequence 2:XP_031752880.1 Gene:cnga3 / 100494840 XenbaseID:XB-GENE-948568 Length:737 Species:Xenopus tropicalis


Alignment Length:787 Identity:521/787 - (66%)
Similarity:593/787 - (75%) Gaps:97/787 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     4 INTQYSHPSRTHLKVKTSDRDLNRAENGLSRAHSSSEETSSVLQPGIAMETRGLADSGQGSFTGQ 68
            :::|.|:|....|.|:|.|.::.|.|||.||.||..|:|||.||..||:|.||||:|.:.||||:
 Frog     5 VSSQSSYPLPHRLSVRTIDEEIERIENGTSRNHSLCEDTSSELQRVIALEPRGLAESRRSSFTGR 69

Human    69 GIARFGRIQKKSQPEKVVRAASRGRPLIGWTQWCAEDGGDESEMALAGSPGCSSGPQGRLSRLIF 133
                                                                  |...||:||:.
 Frog    70 ------------------------------------------------------GGMARLTRLLI 80

Human   134 LLRRWAARHVHHQDQGPDSFPDRFRGAELKEVSSQESNAQANVGSQEPADRGRSAWPLAKCNTNT 198
            .||.||.||:..:||.||||.:||||.:||||||:|||.|:...:||..:|..|.|.||..|.|.
 Frog    81 TLRNWAMRHLTQEDQRPDSFLERFRGPDLKEVSSRESNIQSLQENQERLERVNSHWVLASFNVNN 145

Human   199 SNNTE---------------------EEKK-------------------TKKKDAIVVDPSSNLY 223
            |||.|                     ||||                   .|||:..|:|||||||
 Frog   146 SNNAEDTKNDKKPANENKDQKPEEKKEEKKDDKKDDKKDDKKDDKKKEEEKKKEIFVIDPSSNLY 210

Human   224 YRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDVLVRARTGFLEQGLMV 288
            ||||:.|::||.|||..|:|||||||||...::|||||||:|||:|:.|.|||.|||||||||:|
 Frog   211 YRWLSIISVPVLYNWCFLVCRACFDELQRNSIILWLVLDYTADVIYITDTLVRFRTGFLEQGLLV 275

Human   289 SDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFNRLLKFSRLFEFFDRTETRTNYP 353
            .|..:|.::|..|.|||||:|||:||||.|||:|.||||:||||||:|.|:||||||||||||||
 Frog   276 KDAKKLKENYSKTRQFKLDLLSLLPTDLTYLKIGLNYPELRFNRLLRFGRMFEFFDRTETRTNYP 340

Human   354 NMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEHGRLSRKYIYSLYWSTLTL 418
            |:||||||||||||||||||||||||||.||||||:|||||||.||:|||:||||||||||||||
 Frog   341 NIFRIGNLVLYILIIIHWNACIYFAISKAIGFGTDTWVYPNISHPEYGRLARKYIYSLYWSTLTL 405

Human   419 TTIGETPPPVKDEEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRK 483
            ||||||||||||.|:||||.|||:||||||||||||||||||||||:||||:|||||||||||||
 Frog   406 TTIGETPPPVKDIEFLFVVFDFLIGVLIFATIVGNVGSMISNMNASKAEFQSKIDSIKQYMQFRK 470

Human   484 VTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVE 548
            ||||||.|||:||||||.||||:||||||||||||||||||||||||||||||||||||||||||
 Frog   471 VTKDLEARVIKWFDYLWTNKKTMDEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVE 535

Human   549 LVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGS 613
            |||||||.|||||||||:|||||:|||||.|||||||||||||||||||||||||||||||||||
 Frog   536 LVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGS 600

Human   614 KSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAGADP 678
            ||||||||||||||||||||||||||||||||||:||..||||||||||||.|||||.|:|||||
 Frog   601 KSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKTVLEEKGRQILMKDGLIDEEAAKAGADP 665

Human   679 KDLEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQVK---GGGDKPLADGEVPGD 740
            ||:|||||::.:::|:||||||||||:||:||:|:|||:::||||||   |.......|....||
 Frog   666 KDVEEKVEKMETAMDSLQTRFARLLADYNSTQLKLKQRVTKLESQVKKCYGDNASEGGDSAAEGD 730

Human   741 ATKTEDK 747
            ..:.|||
 Frog   731 PQRKEDK 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNGA3XP_011508856.1 Ion_trans 241..465 CDD:278921 181/223 (81%)
Crp 531..>701 CDD:223736 151/169 (89%)
CAP_ED 537..653 CDD:237999 109/115 (95%)
CLZ 653..723 CDD:293134 51/69 (74%)
cnga3XP_031752880.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 406 1.000 Domainoid score I5838
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H994
Inparanoid 1 1.050 1015 1.000 Inparanoid score I3050
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG48384
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 1 1.000 - - oto158860
Panther 1 1.100 - - LDO PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X511
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.080

Return to query results.
Submit another query.