DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CNGA2 and tax-4

DIOPT Version :9

Sequence 1:NP_005131.1 Gene:CNGA2 / 1260 HGNCID:2149 Length:664 Species:Homo sapiens
Sequence 2:NP_499033.1 Gene:tax-4 / 176297 WormBaseID:WBGene00006526 Length:733 Species:Caenorhabditis elegans


Alignment Length:683 Identity:287/683 - (42%)
Similarity:397/683 - (58%) Gaps:92/683 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    42 ADDDTSSELQRLA----DVDAPQQGRSGFRRIVRLVGIIREWANKN-FREEEPRPDSFLERFRGP 101
            |.|.|:.....||    .:.:|....|...:...|...:|   .|| ......:.:.|::::. |
 Worm     7 APDPTNPSTSGLAPTTNGIGSPPPTASAATKFSILTKFLR---RKNQVHTTTAQQNEFMQKYM-P 67

Human   102 ELQTVTTQEGDGKGDKDGEDKGT---------------KKKFELFVLDPAGDWYYCWLFVIAMPV 151
            ...:...|.....|.....|.|:               :|....:..||:.|.:|.|..|:.:..
 Worm    68 NGNSNAVQPAATGGQPASSDGGSAIEVPPPKESYAVRIRKYLANYTQDPSTDNFYYWTCVVTVAY 132

Human   152 LYNWCLLVARACFSDL-----------QKG----------------------------------- 170
            :||...::||..|:||           ..|                                   
 Worm   133 IYNLLFVIARQVFNDLIGPSSQSLCRFYNGTLNSTTQVECTYNMLTNMKEMPTYSQYPDLGWSKY 197

Human   171 --YYLVWLVLDYVSDVVYIADLFIRLRTGFLEQGLLVKDTKKLRDNYIHTLQFKLDVASIIPTDL 233
              :.::|:..|.:.|.||:.|.|:..|.|:::|||:|::.:|:...|..:.|:::|..|:||.|.
 Worm   198 WHFRMLWVFFDLLMDCVYLIDTFLNYRMGYMDQGLVVREAEKVTKAYWQSKQYRIDGISLIPLDY 262

Human   234 IY-FAVDIHS----PEVRFNRLLHFARMFEFFDRTETRTNYPNIFRISNLVLYILVIIHWNACIY 293
            |. :.:...:    |.:|.|||:.:.|:....:|||||::.||.||:..:|.||::|||||||:|
 Worm   263 ILGWPIPYINWRGLPILRLNRLIRYKRVRNCLERTETRSSMPNAFRVVVVVWYIVIIIHWNACLY 327

Human   294 YAISKSIGFGVDTWVY---------PNITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEE 349
            :.||:.||.|.|.|||         .:|||.    |.|.|:|..|||||.||||||.|.||::.|
 Worm   328 FWISEWIGLGTDAWVYGHLNKQSLPDDITDT----LLRRYVYSFYWSTLILTTIGEVPSPVRNIE 388

Human   350 YLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKGMEAKVIRWFD 414
            |.||..|.:.|||||||||||||||||||:|.|.|||.|:|.:|.||:.|||||.:|.:||:|||
 Worm   389 YAFVTLDLMCGVLIFATIVGNVGSMISNMSAARTEFQNKMDGIKQYMELRKVSKQLEIRVIKWFD 453

Human   415 YLWTNKKTVDEREILKNLPAKLRAEIAINVHLSTLKKVRIFHDCEAGLLVELVLKLRPQVFSPGD 479
            ||||||:::.::::||.||.||:||||:.||..||:|||||.|||||||.||||||:.|||||||
 Worm   454 YLWTNKQSLSDQQVLKVLPDKLQAEIAMQVHFETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGD 518

Human   480 YICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLG 544
            :||:|||||:||||:|.|:|.||.|||...:..|..||.|||:|||||.|||.|||||||:||:|
 Worm   519 FICKKGDIGREMYIVKRGRLQVVDDDGKKVFVTLQEGSVFGELSILNIAGSKNGNRRTANVRSVG 583

Human   545 YSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDENEVATSMEVDVQEKLGQLETNME 609
            |:|||.|||.||..|:.|||||:|:|..:|||||.|:.|||||  |...:..|:|....|...::
 Worm   584 YTDLFVLSKTDLWNALREYPDARKLLLAKGREILKKDNLLDEN--APEEQKTVEEIAEHLNNAVK 646

Human   610 TLYTRFGRLLAEYTGAQQKLKQRITVLETKMKQ 642
            .|.||..||:.|::..:.||.:||.:||..:.:
 Worm   647 VLQTRMARLIVEHSSTEGKLMKRIEMLEKHLSR 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNGA2NP_005131.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 3/6 (50%)
Ion_trans 174..382 CDD:278921 103/221 (47%)
Radical_SAM 415..>468 CDD:302752 34/52 (65%)
Crp 448..632 CDD:223736 110/183 (60%)
CAP_ED 454..570 CDD:237999 81/115 (70%)
CLZ 570..639 CDD:293134 28/68 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 641..664 0/2 (0%)
tax-4NP_499033.1 Ion_trans 197..421 CDD:278921 103/227 (45%)
Crp 487..680 CDD:223736 114/195 (58%)
CAP_ED 493..610 CDD:237999 81/116 (70%)
CLZ 609..675 CDD:293134 27/67 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161452284
Domainoid 1 1.000 224 1.000 Domainoid score I1597
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 551 1.000 Inparanoid score I666
Isobase 1 0.950 - 0 Normalized mean entropy S3407
OMA 1 1.010 - - QHG48384
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 1 1.000 - - otm15350
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - LDO PTHR45638
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2458
SonicParanoid 1 1.000 - - X511
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.750

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