| Sequence 1: | NP_034010.3 | Gene: | Cdx1 / 12590 | MGIID: | 88360 | Length: | 268 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001260641.1 | Gene: | cad / 35341 | FlyBaseID: | FBgn0000251 | Length: | 445 | Species: | Drosophila melanogaster |
| Alignment Length: | 236 | Identity: | 91/236 - (38%) |
|---|---|---|---|
| Similarity: | 107/236 - (45%) | Gaps: | 81/236 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 24 GLGPPTYAPPGPAPAPPQYPDFAGYTHV-EPAPAPPPTWAAPFPAPKDDWAAAYGPGPTASAASP 87
Mouse 88 APLAFGPPPDFSPVPAPPGPGPGILAQSLGA-----------PGAPSSPG--------------A 127
Mouse 128 PRRTPY-EWMRRSVAAAGG-----------------GGSGKTRTKDKYRVVYTDHQRLELEKEFH 174
Mouse 175 YSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK 215 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cdx1 | NP_034010.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..152 | 35/171 (20%) | |
| Caudal_act | 13..138 | CDD:282574 | 31/140 (22%) | ||
| Interaction with DNA. /evidence=ECO:0000250|UniProtKB:P47902 | 157..178 | 16/20 (80%) | |||
| Homeobox | 158..210 | CDD:278475 | 43/51 (84%) | ||
| Interaction with 5-mCpG DNA. /evidence=ECO:0000250|UniProtKB:P47902 | 196..207 | 10/10 (100%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 209..268 | 6/7 (86%) | |||
| cad | NP_001260641.1 | Homeobox | 295..347 | CDD:278475 | 43/51 (84%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 99 | 1.000 | Domainoid score | I7058 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0850 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 136 | 1.000 | Inparanoid score | I4534 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0001802 | |
| OrthoInspector | 1 | 1.000 | - | - | otm42881 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107786 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24332 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2707 |
| SonicParanoid | 1 | 1.000 | - | - | X14 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 11 | 10.850 | |||||