DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and CG6800

DIOPT Version :10

Sequence 1:NP_034004.2 Gene:Cdk7 / 12572 MGIID:102956 Length:346 Species:Mus musculus
Sequence 2:NP_650984.1 Gene:CG6800 / 42562 FlyBaseID:FBgn0038902 Length:302 Species:Drosophila melanogaster


Alignment Length:283 Identity:110/283 - (38%)
Similarity:169/283 - (59%) Gaps:8/283 - (2%)


- Green bases have known domain annotations that are detailed below.


Mouse    11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
            ||:.|:.:|||....|:||.|...|:.|||||:.|.::.   ..|....|||||.||......|:
  Fly     8 RYKMLEKIGEGVHGCVFKAIDLQRNKEVAIKKVALKNKF---GNIALNTLREIKTLQLCKSEYIL 69

Mouse    76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP 140
            .::|.:...:.:|||.::....|...:|.....|:...::.:.....:|:.|||:..::|||:||
  Fly    70 DIIDIYPDLTGLSLVLEYQPDTLYNRLKSEVNPLSRQQVRKFAHQMFKGIAYLHEAGLMHRDIKP 134

Mouse   141 NNLLLDENGVLKLADFGLAKSF--GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL 203
            .|||:.:..:||:||||||:.:  ...:|.|:.||.||||||||:|||::.||.||||||.||::
  Fly   135 ANLLISDTDMLKIADFGLARLYFPEDESRLYSPQVSTRWYRAPEILFGSQKYGTGVDMWAAGCVV 199

Mouse   204 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY--VTFKSFPGVPLQHIFIAAGD 266
            ||:|..||...|.:|::||..|..|||:|...|||::.|||||  :.|.:..|:...::|.:...
  Fly   200 AEMLRGVPLFAGTTDIEQLAIIIRTLGSPRLNQWPELTSLPDYSKIRFPNSVGIHWDNLFPSCTH 264

Mouse   267 DL-LELIQGLFLFNPCTRTTASQ 288
            .: :.|:..|.::||..|..||:
  Fly   265 AVEINLVSNLVVYNPKNRLKASE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_034004.2 STKc_CDK7 11..308 CDD:270833 110/283 (39%)
CG6800NP_650984.1 STKc_CCRK 8..295 CDD:270826 110/283 (39%)

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