DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and Cdk7

DIOPT Version :9

Sequence 1:NP_034004.2 Gene:Cdk7 / 12572 MGIID:102956 Length:346 Species:Mus musculus
Sequence 2:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster


Alignment Length:343 Identity:229/343 - (66%)
Similarity:271/343 - (79%) Gaps:6/343 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MAVDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
            |..:...:.:||.||.|||||||||||||||..||||||:||||.|.|.:|:||||||||||||:
  Fly     1 MLPNANDKTERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKI 65

Mouse    66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
            ||||.|.|||||:|.||..||:|||||||:||||||||||.::||.::||||.:|||:||||||.
  Fly    66 LQELQHENIIGLVDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHL 130

Mouse   131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVD 195
            :|||||||||||||::.:|:||:.|||||||||||||.|||.|||||||:||||||||.||.|||
  Fly   131 NWILHRDLKPNNLLVNSDGILKIGDFGLAKSFGSPNRIYTHHVVTRWYRSPELLFGARQYGTGVD 195

Mouse   196 MWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGVPLQHI 260
            |||||||||||:|||||:|||||||||||||.|||||||.:||.:..|.||:.|::|||.||.:|
  Fly   196 MWAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNFPGTPLDNI 260

Mouse   261 FIAAGDDLLELIQGLFLFNPCTRTTASQALKTKYFSNRPGPTPGCQLPRPNCPVEALKEPANPTV 325
            |.|||:||:.|:|.||..||..|.:..:||...||:|:|.||.|.:||.|:. :.|.||.|||..
  Fly   261 FTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMPSA-ILAAKEGANPQT 324

Mouse   326 -----ATKRKRAEALEQG 338
                 |.|||..|...:|
  Fly   325 GDTKPALKRKLVETTVRG 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_034004.2 PTZ00024 7..308 CDD:240233 213/300 (71%)
STKc_CDK7 11..308 CDD:270833 213/296 (72%)
Cdk7NP_511044.1 PTZ00024 6..308 CDD:240233 213/301 (71%)
STKc_CDK7 11..308 CDD:270833 213/296 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833866
Domainoid 1 1.000 435 1.000 Domainoid score I566
eggNOG 1 0.900 - - E1_KOG0659
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1363
Inparanoid 1 1.050 467 1.000 Inparanoid score I1514
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003675
OrthoInspector 1 1.000 - - oto92220
orthoMCL 1 0.900 - - OOG6_103547
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R249
SonicParanoid 1 1.000 - - X2548
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.780

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