| Sequence 1: | NP_033997.1 | Gene: | Cdh4 / 12561 | MGIID: | 99218 | Length: | 913 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001027277.1 | Gene: | CadN / 35070 | FlyBaseID: | FBgn0015609 | Length: | 3101 | Species: | Drosophila melanogaster |
| Alignment Length: | 1847 | Identity: | 315/1847 - (17%) |
|---|---|---|---|
| Similarity: | 465/1847 - (25%) | Gaps: | 1039/1847 - (56%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 40 YTALISPNVLEGEKLLKVEFSSCVGTKGMQYETNSLDFKVGADGTVFATRELKIPSEQVAFTVTA 104
Mouse 105 RERQSAEQWAAMVRLLVAQ--TSSAHSEHKKG----QTVALD--PSQPPND-------------- 147
Mouse 148 ---------------------------TLL--PWPQHQSSGGLR--------------------- 162
Mouse 163 ------------------------RQKRDWVI---------PPI--------NVPENSRGPFPQQ 186
Mouse 187 LVRIRS---DKDNDIPIRYSITGVG--ADQPPMEVFNIDSMSGRMYVTRPMDREE---RASYHLR 243
Mouse 244 AHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTANDADD-STTA 307
Mouse 308 NGMVRY----RIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQATDMEGNLNYG 368
Mouse 369 LSNTATAIITVTDVNDNPPEFTTSTFAGEV--------PENRIETVVANLTVMDRDQPHSPNWNA 425
Mouse 426 VYRIISGDPSGHFSVRTDPVTNE---GMVTVVKAVDYE---LNRAFMLTVMVSNQAPLASGIQMS 484
Mouse 485 FQSTAGVTISVTDVNE-APYFPSNHKLIRLEEGVPAGTALTTFSAVDPDRFMQQAVRYS--KLSD 546
Mouse 547 PANWLHINTSNGQITTAAILDRESLYTKNNVYEATFLAADNGIPPASGTGTLQIYLIDINDNAPQ 611
Mouse 612 LL--------------------------------------------------------------- 613
Mouse 614 ----------------------------------------------------------------- 613
Mouse 614 ----------------------------------------------------------------- 613
Mouse 614 -----------------PKEA-------------------------------------------- 617
Mouse 618 ----------------------------------------------------------------- 617
Mouse 618 -----QICERPGLNAINI--------------------TAADAD--------------------- 636
Mouse 637 --MDPNIGPY------------------------------------------------------- 644
Mouse 645 ----------------------------------------------------------------- 644
Mouse 645 ----------------------------------------------------------------- 644
Mouse 645 ------------------VFEL------------------------------------------- 648
Mouse 649 --------------PFIPTTVRK------------------------------------------ 657
Mouse 658 -------------------------------------NWTITRLN--GDYAQLSL---------- 673
Mouse 674 ---------RILYLEAGVY--------------------------------DVPIIVTDSG---- 693
Mouse 694 --------------NPPLSN---------TSVIKVKVCPCDE----------------------- 712
Mouse 713 NG-----------------------DCTTVGAVAAAGLGTGAIVAILICIVILLIMVLLFVVWMK 754
Mouse 755 RREKERHTKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQPEAMEHVLSKTPGVRRVDE 818
Mouse 819 RPVGAEPQYPVRPVVP-HPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNS 882
Mouse 883 SSSGD-QDYDYLNDWGPRFKKLADMYG 908 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cdh4 | NP_033997.1 | Cadherin_pro | 30..119 | CDD:285913 | 19/78 (24%) |
| E_set | 170..270 | CDD:298831 | 29/124 (23%) | ||
| Cadherin_repeat | 278..385 | CDD:206637 | 41/111 (37%) | ||
| Cadherin_repeat | 393..500 | CDD:206637 | 27/120 (23%) | ||
| Cadherin_repeat | 511..608 | CDD:206637 | 35/98 (36%) | ||
| E_set | 616..708 | CDD:298831 | 35/667 (5%) | ||
| Cadherin_C | 766..908 | CDD:279398 | 65/144 (45%) | ||
| CadN | NP_001027277.1 | Cadherin_repeat | 178..301 | CDD:206637 | |
| Cadherin_repeat | 337..396 | CDD:206637 | |||
| E_set | 449..541 | CDD:298831 | |||
| Cadherin_repeat | 549..>625 | CDD:206637 | |||
| Cadherin_repeat | 655..752 | CDD:206637 | |||
| Cadherin_repeat | 765..853 | CDD:206637 | |||
| Cadherin_repeat | 862..964 | CDD:206637 | |||
| Cadherin_repeat | 973..1074 | CDD:206637 | |||
| Cadherin_repeat | 1083..1166 | CDD:206637 | |||
| Cadherin_repeat | <1219..1298 | CDD:206637 | |||
| Cadherin_repeat | 1310..1414 | CDD:206637 | 29/127 (23%) | ||
| Cadherin_repeat | 1423..1514 | CDD:206637 | 7/90 (8%) | ||
| Cadherin_repeat | 1522..1630 | CDD:206637 | 26/107 (24%) | ||
| Cadherin_repeat | 1638..1741 | CDD:206637 | 40/110 (36%) | ||
| Cadherin_repeat | 1762..1861 | CDD:206637 | 26/109 (24%) | ||
| Cadherin_repeat | 1871..1966 | CDD:206637 | 35/99 (35%) | ||
| Cadherin_repeat | 1974..2083 | CDD:206637 | 0/108 (0%) | ||
| EGF | 2350..2380 | CDD:278437 | 3/29 (10%) | ||
| LamG | 2385..2570 | CDD:238058 | 0/184 (0%) | ||
| EGF_2 | <2605..2631 | CDD:285248 | 0/25 (0%) | ||
| Laminin_G_2 | 2665..2800 | CDD:280389 | 9/134 (7%) | ||
| EGF_CA | 2869..2907 | CDD:238011 | 2/37 (5%) | ||
| Cadherin_C | 2952..3088 | CDD:279398 | 65/144 (45%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 130 | 1.000 | Domainoid score | I5176 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||