DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cd81 and Tsp42Er

DIOPT Version :9

Sequence 1:NP_598416.1 Gene:Cd81 / 12520 MGIID:1096398 Length:236 Species:Mus musculus
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:226 Identity:59/226 - (26%)
Similarity:101/226 - (44%) Gaps:54/226 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    10 IKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLLYLELGNKPAP-NTFYVGIYILIAVGAVMM 73
            |:||.|:|||:.     .:||:|         |.::.:...::.|| :...:|:|  ||||:::.
  Fly     8 IRYLAFLFNFLC-----AVLGIA---------TIVVNVIAIDQIAPKDQLILGLY--IAVGSIVF 56

Mouse    74 FVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFV-----NKDQIAKDVKQFYDQALQQ 133
            .:.|.||:|||:||.|:...:.|.::::....:   :..||     .:|.|.| :||.:  |.|.
  Fly    57 LLSFFGCFGAIKESICVTWAYATSMLVMLIVSI---VMLFVFRMHFEEDSITK-LKQAF--AKQT 115

Mouse   134 AVMDDDANNAKAVVKTFHETLNCCG-------SNALTTLTTTILRNSLCPSGGNILTPLLQQDCH 191
            ...|     |.|..:|.::   |||       .:|..|:.::....:..|.....|..:..|   
  Fly   116 NTFD-----AMAEYQTQYQ---CCGIYKLKDYGDAYITVPSSCYDQNDTPYRDGCLAKMETQ--- 169

Mouse   192 QKIDELFSG------KLYLIGIAAIVVAVIM 216
              .:||..|      .|.:|.|.|...:.||
  Fly   170 --YEELLKGPKIVGWMLMVIEIGAFTFSTIM 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cd81NP_598416.1 Tetraspannin 9..230 CDD:278750 59/226 (26%)
CD81_like_LEL 113..202 CDD:239404 24/106 (23%)
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 57/221 (26%)
tetraspanin_LEL 93..174 CDD:239401 22/96 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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