DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cd63 and Tsp39D

DIOPT Version :10

Sequence 1:NP_031679.1 Gene:Cd63 / 12512 MGIID:99529 Length:238 Species:Mus musculus
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:242 Identity:78/242 - (32%)
Similarity:129/242 - (53%) Gaps:22/242 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 GGMKCVKFLLYVLLLAFCACAVGLIAIGVAVQVVLKQ----AITHETTAGSLLPVVIIAVGAFLF 65
            ||:.|||:|.:...|.|....:.:..:|..||:....    ...|..||    |::::.|||.:.
  Fly     4 GGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTA----PIILMIVGAAVA 64

Mouse    66 LVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFNKSFQQQMQNYLK-- 128
            ::.|:|||||.||:.|::::||:...:|.|.|:.:.:||||....:.......|...||:|.:  
  Fly    65 VICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERA 129

Mouse   129 DNKTATILDKLQKENNCCGASNYTDWENIPGMAKDRVPDSCC--INITVG--CGNDFKESTIHTQ 189
            |.:.|..|  ||.|.:|||.:...|||.:  .....:|.:||  ||::..  |.|  ..:|.|  
  Fly   130 DYRDAWTL--LQTELDCCGINGPNDWETV--YRNSTLPAACCSVINLSEAKECTN--THATQH-- 186

Mouse   190 GCVETIAIWLRKNILLVAAAALGIAFVEVLGIIFSCCLVKSIRSGYE 236
            ||::.:...|....|::|:..||:|.:::|.|:|:|||.:|.|..|:
  Fly   187 GCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRSYD 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cd63NP_031679.1 Tetraspanin 10..229 CDD:459767 72/228 (32%)
CD63_LEL 105..203 CDD:239419 30/103 (29%)
Lysosomal targeting motif. /evidence=ECO:0000269|PubMed:21041449 234..238 1/3 (33%)
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 72/228 (32%)
tetraspanin_LEL 131..>167 CDD:351888 12/39 (31%)

Return to query results.
Submit another query.