DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scarb2 and dsb

DIOPT Version :9

Sequence 1:NP_031670.1 Gene:Scarb2 / 12492 MGIID:1196458 Length:478 Species:Mus musculus
Sequence 2:NP_001097477.1 Gene:dsb / 38252 FlyBaseID:FBgn0035290 Length:615 Species:Drosophila melanogaster


Alignment Length:461 Identity:148/461 - (32%)
Similarity:241/461 - (52%) Gaps:29/461 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LLLVTSVTLLVARVFQKA--VDQTIEKNMVLQNGTKVFNSWEKPPLPVYIQFYFFNVTNPEEILQ 77
            ::::..:||::..:....  :|..|.||:.|.|.|..::.|::|.:....:.|.:|||||:..|:
  Fly    82 VIIIGIITLILGIILSSMPWLDYFILKNLRLWNDTLSYHYWQRPGVIRLTKLYIYNVTNPDGFLR 146

Mouse    78 GEIPLLEEVGPYTYRELRNKANIQFGENGTTISAVTNKAYVFERNQSVGDPNVDLIRTINIPLLT 142
            ||.|.|:||||:.|||...|.|::|.||..|:|....|...|....|: |.:.. |.|.||||||
  Fly   147 GEKPHLQEVGPFVYREDMQKVNVKFHENNYTVSYQHKKILQFVPELSI-DKDTP-ITTPNIPLLT 209

Mouse   143 VVDLAQLT--LLRELIEAMLKAYQQKLFVIHTVHELLWGYKDEILSLVHIFKP-DVSP--NFGLF 202
            :..|:...  ||.:.|..::.|.|.|.|:..|..:|.:||.|.::||.|.|.| .:.|  ..||.
  Fly   210 LTSLSPKLGYLLSKTISVVVTAAQFKPFINVTAEQLAFGYDDALVSLAHRFYPKHMRPMERMGLL 274

Mouse   203 YERNGTNDGEYVFLTGEDNYLNFSKIVEWNGKTSLDWWTTDTCNMINGTDGDSFHPL-ISKDEVL 266
            ..||||........||.|:...|..|.:.||...|..|:...|..|.|::|..|.|. ::|.||:
  Fly   275 LGRNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKSEVV 339

Mouse   267 YLFPSDLCRSVHITFSSFENVEGLPAFRYKVPAEILANTSENAGFCIPEGNCMDS-------GVL 324
            :::..||||.:.:.:......:|:.|..:::|.....:::.|     ||..|.|:       |:.
  Fly   340 HIYDKDLCRIIPLKYVESLEKDGIAADLFRLPNNSYGDSAHN-----PENKCYDTSEYEPIQGLQ 399

Mouse   325 NISICKNGAPIIMSFPHFYQADEKFVSAIKGMHPNKEEHESFVDINPLTGIILRGAKRFQINTYV 389
            |||.|:.|||:.:|.|||:::....:::::|:.|.:|:||::..|.|..|:.|.|..|.|:|..|
  Fly   400 NISPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGKVRIQLNLKV 464

Mouse   390 RKLDDFVETGDIRTMVFPVMYLNESVLIDKETANQLKS--VINTTLVVTNIPY--IIMALGVFFG 450
            .:..|.....|.|..|||||:|.|.:   .|....:|.  .:.|.:..:.:|.  .:|.||..|.
  Fly   465 TRAKDVYPVRDFRDFVFPVMWLEEGI---SELTPAIKRWIYLGTVIAPSAVPIGSYLMILGGAFA 526

Mouse   451 LVFTWL 456
            ::|:::
  Fly   527 IIFSFV 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scarb2NP_031670.1 CD36 28..455 CDD:279474 146/445 (33%)
Important for interaction with GBA 155..191 13/35 (37%)
dsbNP_001097477.1 CD36 103..532 CDD:279474 146/438 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm8809
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.880

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