DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scarb2 and CG31741

DIOPT Version :9

Sequence 1:NP_031670.1 Gene:Scarb2 / 12492 MGIID:1196458 Length:478 Species:Mus musculus
Sequence 2:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster


Alignment Length:485 Identity:110/485 - (22%)
Similarity:211/485 - (43%) Gaps:46/485 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 CC---------FYTAGTLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFNSWEKPPLP 59
            ||         |...|      |:.::.:.:|..:.....|.|...:.|...:.::|.|...|.|
  Fly     5 CCSVRQQKIWVFSMGG------LILAIGIFLASAWPAVSRQWIRSLLPLAPNSFIYNRWVTTPTP 63

Mouse    60 VYIQFYFFNVTNPEEI-LQGEIPLLEEVGPYTYRELRNKANIQFGENGTTISAVTNKAYVFERNQ 123
            ||...:.||.|||.:: .:|..|..|::||||:.:.:.|.::::.:...|........::.|::.
  Fly    64 VYSTVFLFNWTNPGDLNTEGVKPHFEQLGPYTFSDFKVKEDLEWNQPQVTYFGKRTWHFLPEKSN 128

Mouse   124 SVGDPNVDLIRTINIPLLTVVDLAQ--LTLLRELIEAMLKAYQQKLFVIHTVHELLW-GYKDEIL 185
            ...|   |::...:.|.||....::  ..:||:::...|........:.||..:.|: ||.|.:|
  Fly   129 GSLD---DVVIAPHFPTLTAALYSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLL 190

Mouse   186 SLVHIFKPDVSP----NFGLFYERNG--TNDGEYVFLTGEDNYLNFSKIVEWNGKTSLDWWTTDT 244
            ..|......:.|    .||.|||||.  |.:|.:...||..:......::.|||:.:..::..: 
  Fly   191 DFVEQLHSPLLPVYDNTFGWFYERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNGENTTGFYPGE- 254

Mouse   245 CNMINGTDGDSFHPLISKDEVLYLFPSDLCRSVHITFSSFENVEGLPAFRYKVPAEILAN---TS 306
            |..:||:.|:.:.|..:.|:...:|..|..|.:::.......::|:..:||:.....:.|   :.
  Fly   255 CGKVNGSTGELWSPYRTWDQPTTIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSP 319

Mouse   307 ENAGFCIPEGNCMDSGVLNISICKNGAPIIMSFPHFYQADEKFVSAIKGMHPNKEEHESFVDINP 371
            :...||:....|..:|||:........|..||.|||:..|:.:.....|:.|.:.||..:|.:.|
  Fly   320 DTECFCLKNRECPRNGVLDYGPPAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEP 384

Mouse   372 LTGIILRGAKRFQINTYVRKLDDFVETGDIRTMVF----PVMYLNESVLIDKETANQLKSVINTT 432
            ..||.|....:..|:|.|.: |:.::.  .:.:.:    |:..:.....:|:.....||..:|..
  Fly   385 TLGIPLSLRGQLMISTKVVR-DEAIDL--FKNVAYDHYAPLFTMRLHAELDEGLTKLLKLALNAA 446

Mouse   433 LV--VTNIPYIIMAL-----GVFFGLVFTW 455
            ::  .|.|..:::.:     |:|......|
  Fly   447 IIGMYTGIGLVLLGMSIVVTGIFITKKHKW 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scarb2NP_031670.1 CD36 28..455 CDD:279474 103/450 (23%)
Important for interaction with GBA 155..191 9/36 (25%)
CG31741NP_724088.2 CD36 21..469 CDD:279474 104/454 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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