DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cd36 and pes

DIOPT Version :9

Sequence 1:NP_001153027.1 Gene:Cd36 / 12491 MGIID:107899 Length:472 Species:Mus musculus
Sequence 2:NP_001137808.1 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster


Alignment Length:477 Identity:123/477 - (25%)
Similarity:219/477 - (45%) Gaps:36/477 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 RNCGLIAGAVIGAVLAVFGGILMPVG--DMLIEKTIKREVVLEEGTTAFKNWVKTGTTVYRQFWI 67
            |:|..: |.|:..:..:..||.:...  || ..:...:|:.|...:.:|:.|..:...:....::
  Fly     6 RHCARL-GIVLLGICCIASGIYLFRNWIDM-FTRMRGQEMALSPNSRSFEGWKVSPLPLDFDIYL 68

Mouse    68 FDVQNPDDVAKNSS-KIKVKQRGPYTYRVRYLAKENITQDPEDHTVSFVQPNGAIFEPSLSVGTE 131
            |:..||||....|: |...:|.|||.:|.: ..|.:|.....:.:|||.:.:...|:.:.|.|:.
  Fly    69 FNWTNPDDFYVGSNKKPHFEQLGPYRFREK-PDKVDIEWHNHNASVSFHKKSWFYFDAAGSNGSL 132

Mouse   132 DDNFTVLN-LAVAAAPHIYQNSFVQVVLNSLIKKSKSSMFQTRSLKELLW-GYKDPFLSL----- 189
            .|..|.:| :|.:||.....:.|.:..:|...|..:..:..|:::.|:|: ||:.||:|:     
  Fly   133 WDKVTTVNSVAHSAARRAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPFISVGKLLR 197

Mouse   190 ---VPYPISTTVGVFYPYNDT--VDGVYKVFNGKDNISKVAIIESYKGKRNLSYWPSYCDMINGT 249
               |||   ..:|..||.|.:  .||...:|.|.|:|:|:..|.::....:...:...|..::|:
  Fly   198 PQDVPY---KRIGYHYPRNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEGTCGQVHGS 259

Mouse   250 DAASFPPFVEKSRTLRFFSSDICRSIYAVFGSEIDLKGIPVYRFVLPANAFASPLQNPDNHCFCT 314
            ....|||.:....|:..:...:||:|...:...:.:.|:..|:|....:|..:....||..|:| 
  Fly   260 MGEFFPPNLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLYPDTRCYC- 323

Mouse   315 EKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLHPNEDEHRTYLDVEPITGF 379
               :...|...||::||.|.....||:|.|||..|.|...|.||||.|..::|..::.:||..|.
  Fly   324 ---VGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFFMALEPNAGV 385

Mouse   380 TLQFAKRLQVNILVKPARKIEALKNLKRPYIVPILWLNETGTIGDEKAEMFKTQVTGKIKLLGMV 444
            .:......|.|..::|...|...:|:. ..::|::|..|...:.:|.|.  ...:...|.|||.:
  Fly   386 PMDVGGGFQANYYMEPIPGITLYENVP-TVMIPMMWCEERVRVSEEIAA--DIALVPLIVLLGQI 447

Mouse   445 EMALLGIGVVMFVAFMISYCAC 466
            ...:|..|.::        |.|
  Fly   448 VTGILLAGGLI--------CTC 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cd36NP_001153027.1 CD36 16..463 CDD:366481 117/461 (25%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000269|PubMed:15748999 93..120 6/26 (23%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472 2/7 (29%)
pesNP_001137808.1 CD36 14..463 CDD:279474 120/468 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.