DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cct5 and CCT4

DIOPT Version :9

Sequence 1:NP_031663.1 Gene:Cct5 / 12465 MGIID:107185 Length:541 Species:Mus musculus
Sequence 2:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster


Alignment Length:510 Identity:208/510 - (40%)
Similarity:313/510 - (61%) Gaps:22/510 - (4%)


- Green bases have known domain annotations that are detailed below.


Mouse    36 SHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDD 100
            |:|.|||||::.:||||||.|:|||:...:|:|:|||||||||..|:|.|..||::||||::||.
  Fly    29 SNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKMLVELSRAQDV 93

Mouse   101 EIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPL 165
            ..|||||.|||:||||||..|:||.:|:||..|:|.:::.:..|::.|.::|..  :::::.|.|
  Fly    94 AAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQMSTP--IELDDRETL 156

Mouse   166 IQTAKTTLGSKVINSCHRQMAEIAVNAVLTVADM-ERRDVDFELIKVEGKVGGRLEDTKLIKGVI 229
            |::|.|:|.|||::.....:|.|||:|||.|.|. :...||.:.|||...:||.:|||:|:.|::
  Fly   157 IKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETSVDLKNIKVISSLGGTVEDTELVDGLV 221

Mouse   230 VDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEK---FEEMIKQ 291
            .....:....||::..|||.::......||....|.   :.|.||.|:.:..||:   ...::||
  Fly   222 FTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHN---VIVSDYAAMDRVLKEERSYILNIVKQ 283

Mouse   292 IKETGANLAICQWGF-----DDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSE 351
            ||::|.|:.:.|...     .|.|.|.|.:.....|:.|...:||.:......|.:......|:|
  Fly   284 IKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVEREDIEFVCKTLHCRPIASLDHFTAE 348

Mouse   352 KLGFAGVVQEISFGTTKDKMLVIEKCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRD 415
            .|..|.:|:|::.||  :|.:.|...:| .|.|:|..||.||:::|||.|||||||||:|.|::.
  Fly   349 NLSSADLVEEVASGT--NKFVKITGIQNMGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVKL 411

Mouse   416 NRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRAR 480
            ...:.||||.||..||.::..|.....::.|..|||||||||||..|:||:|:|||.|:||:|.|
  Fly   412 RAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVIPSTLAENAGLNPIATVTELRNR 476

Mouse   481 QVK-ESNPALGIDCLHKGS-NDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
            ..: |.|..:.:   .||: .|:..::|::.|:.....|:|||:.:|.|||||||
  Fly   477 HAQGEKNAGINV---RKGAITDIFAENVVQPLLVSISSITLATETIRSILKIDDI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cct5NP_031663.1 TCP1_epsilon 10..535 CDD:239455 208/510 (41%)
Cpn60_TCP1 44..533 CDD:278544 200/500 (40%)
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 208/510 (41%)
Cpn60_TCP1 37..529 CDD:278544 202/502 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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