Sequence 1: | NP_033964.1 | Gene: | Noct / 12457 | MGIID: | 109382 | Length: | 429 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_732964.1 | Gene: | twin / 42880 | FlyBaseID: | FBgn0011725 | Length: | 567 | Species: | Drosophila melanogaster |
Alignment Length: | 377 | Identity: | 89/377 - (23%) |
---|---|---|---|
Similarity: | 149/377 - (39%) | Gaps: | 94/377 - (24%) |
- Green bases have known domain annotations that are detailed below.
Mouse 120 PPRYQRDFVDL------RTDCSSSHSPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLIL 178
Mouse 179 EEILAYQPDILCLQEV--DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQN 241
Mouse 242 RFKLISSTNIRLTAMTLKT--------------NQVAIAQTLECKESGRQFCIAVTHLK------ 286
Mouse 287 -ARTGWERFRSAQGCD-------LLQN-LQNITQGAK-------------IPLIVCGDFNAEPTE 329
Mouse 330 EVYKHFASSSLNLN-------------------------SAYKLLSPDGQSEPPYTTWKIRTSGE 369
Mouse 370 CRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRL---PSFHYPSDHLSLVCD 418 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Noct | NP_033964.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 21..68 | ||
Deadenylase_nocturnin | 142..421 | CDD:197330 | 82/349 (23%) | ||
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9UK39 | 217..219 | 1/1 (100%) | |||
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9UK39 | 284..287 | 0/9 (0%) | |||
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9UK39 | 322..324 | 1/1 (100%) | |||
Interaction with PPARG. /evidence=ECO:0000269|PubMed:20498072 | 341..351 | 2/34 (6%) | |||
twin | NP_732964.1 | LRR_4 | 74..114 | CDD:289563 | |
LRR_8 | 75..130 | CDD:290566 | |||
leucine-rich repeat | 76..98 | CDD:275378 | |||
LRR_4 | 97..136 | CDD:289563 | |||
leucine-rich repeat | 99..121 | CDD:275378 | |||
leucine-rich repeat | 122..144 | CDD:275378 | |||
leucine-rich repeat | 145..156 | CDD:275378 | |||
Deadenylase_CCR4 | 209..550 | CDD:197331 | 82/348 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5239 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |