DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccnd1 and CycB3

DIOPT Version :10

Sequence 1:NP_001366177.1 Gene:Ccnd1 / 12443 MGIID:88313 Length:317 Species:Mus musculus
Sequence 2:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster


Alignment Length:242 Identity:62/242 - (25%)
Similarity:100/242 - (41%) Gaps:35/242 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    32 LKTEETCAPSVSYFKCVQKEIVPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKK 96
            ||..|...|...|.. .|..:...||.::..||:||.|..:...|...||:..:|.:|..|.:.|
  Fly   313 LKVREAEFPIADYMP-RQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINK 376

Mouse    97 SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFI 161
            .:||||||...|:|.|..|..|...|......|.:...:||::||...:..:|::|.....:.|:
  Fly   377 EKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYD
LGIPLSYRFL 441

Mouse   162 EHF--LSKMPEADENKQTIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAMQGLNLGSPNN-- 222
            ..:  .:|:|     ..|:.. |:..:.|...|...||...|.:|:.::..|::  ..|.|..  
  Fly   442 RRYARCAKVP-----MPTLTL-ARYILELSLMDYANISFSDSQMASAALFMALR--MHGGPGQLD 498

Mouse   223 ---------FLSCYRTTHFLSRVIKCDPVKALATGLWLNKDPLHLRP 260
                     :.:.|:...|      .:.|.||..|       ||.:|
  Fly   499 KQTWTSTLIYYTGYQLADF------AEIVTALNAG-------LHRKP 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccnd1NP_001366177.1 CYCLIN_CCND1_rpt1 3..151 CDD:410276 38/118 (32%)
CYCLIN_CCND1_rpt2 156..287 CDD:410279 23/118 (19%)
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 38/118 (32%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 23/119 (19%)

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