DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccnd1 and CycB

DIOPT Version :10

Sequence 1:NP_001366177.1 Gene:Ccnd1 / 12443 MGIID:88313 Length:317 Species:Mus musculus
Sequence 2:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster


Alignment Length:242 Identity:64/242 - (26%)
Similarity:111/242 - (45%) Gaps:26/242 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse    49 QKEIVPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS-LEPLKKSRLQLLGATCMFVASK 112
            |||:...||.::..|:.||..:.....|.|.||:..:||:|. ::..|::.|||:|.|.:|:|:|
  Fly   282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATK 346

Mouse   113 MKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQT 177
            .:|..|.........||::....::.||||.:...:..||:...|..|:..: ||...|::...|
  Fly   347 YEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDC
NLSRPLPIHFLRRY-SKAAGAEDEHHT 410

Mouse   178 IRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAMQGLN----LGSPNNFLSCYRTTHFLSRVIK 238
            :.|:   |:.|.:.|.:..:..||.:||.|:..::..||    .|:..|......|..|.||.  
  Fly   411 MSKY---FIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRY-- 470

Mouse   239 CDPVKALATGLWLNKDPLHLRPPLQDCLRACQEQIEALLESSLRQAQ 285
                           ...||||..:...:..::..:|.|::...:.|
  Fly   471 ---------------SAAHLRPITRLIAKLARDAPQAKLKAIYNKYQ 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccnd1NP_001366177.1 CYCLIN_CCND1_rpt1 3..151 CDD:410276 32/102 (31%)
CYCLIN_CCND1_rpt2 156..287 CDD:410279 30/134 (22%)
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 32/101 (32%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 30/135 (22%)

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