DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbx2 and HP1e

DIOPT Version :9

Sequence 1:XP_006532166.1 Gene:Cbx2 / 12416 MGIID:88289 Length:594 Species:Mus musculus
Sequence 2:NP_649878.1 Gene:HP1e / 41108 FlyBaseID:FBgn0037675 Length:174 Species:Drosophila melanogaster


Alignment Length:49 Identity:15/49 - (30%)
Similarity:21/49 - (42%) Gaps:13/49 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse   195 SDEE---EDDSDLD----------SKRGPRGRETHPVPQKKAQILVAKP 230
            |||:   |..:|||          .|...||:|.:...:.||:.|...|
  Fly    52 SDEDNTWESAADLDCHSLIDSIESQKSLKRGQELNNQYETKAKRLKIDP 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cbx2XP_006532166.1 CBX7_C 553..585 CDD:375056
HP1eNP_649878.1 CHROMO 25..67 CDD:237991 7/14 (50%)
Chromo_shadow 113..164 CDD:279701
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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