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Protein Alignment Cbx2 and Su(var)205
DIOPT Version :9
Sequence 1: | XP_006532166.1 |
Gene: | Cbx2 / 12416 |
MGIID: | 88289 |
Length: | 594 |
Species: | Mus musculus |
Sequence 2: | NP_476755.1 |
Gene: | Su(var)205 / 34119 |
FlyBaseID: | FBgn0003607 |
Length: | 206 |
Species: | Drosophila melanogaster |
Alignment Length: | 116 |
Identity: | 27/116 - (23%) |
Similarity: | 41/116 - (35%) |
Gaps: | 37/116 - (31%) |
- Green bases have known domain annotations that are detailed below.
Mouse 104 SRRSKLKASTATGNREPCSCYPGASSGAASPSTSPFCALSSRIAAAALLDHAQLPLALETLHQGS 168
||:.:.|::.:..:|...|.....:.|.||.||| ..|.|
Fly 73 SRKDEEKSAASKKDRPSSSAKAKETQGRASSSTS---TASKR----------------------- 111
Mouse 169 QRAEPDAPSKSKSSSSSSSSTSSSSSSDEEEDDSDLDSKRG-PRGRETHPV 218
:..||.|||.:| |..::|.|:|...:....| .||.|...:
Fly 112 KSEEPTAPSGNK----------SKRTTDAEQDTIPVSGSTGFDRGLEAEKI 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Cbx2 | XP_006532166.1 |
CBX7_C |
553..585 |
CDD:375056 |
|
Su(var)205 | NP_476755.1 |
CHROMO |
24..72 |
CDD:237991 |
|
ChSh |
141..202 |
CDD:197638 |
4/12 (33%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1628171at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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