Protein Alignment Cbx1 and HP1D3csd

DIOPT Version :10

• Sequence 1: NP_031648.1
• Gene: Cbx1 / 12412
• MGIID: 105369
• Length: 185
• Species: Mus musculus
• Sequence 2: NP_573358.1
• Gene: HP1D3csd / 32906
• FlyBaseID: FBgn0030994
• Length: 179
• Species: Drosophila melanogaster
• Alignment Length: 171
• Identity: 35/171 - (20%)
• Similarity: 66/171 - (38%)
• Gaps: 32/171 - (18%)

Mouse     3 KKQN--KKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENL------- 58
            :|:|  :|:.::..|.:::|.|.|:               ..|..|.|..:..|.:::
  Fly    23 QKENDQQKENDQQKENDQQEEVQEE---------------PTKDESKEAGSTPPPKHMGVHNSAR 72

Mouse    59 -DCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERI 122
             :...|:.|.|..|.   |.|.:.||....:.|. ....||:|.........   ..||...|.:
  Fly    73 AELARLLVELLVQQA---ELDATNGGSVSGNLDG-GNSNESQPLNVPPTDAL---LVRGKAIENV 130

Mouse   123 IGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISF 163
            :.:......:.|::.||.|...:.||.:|.....|:::|.:
  Fly   131 MYSYMLGDTVYFIVTWKGSKWGEAVPVQEIKHVHPKLLIDY 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cbx1	NP_031648.1	CD_HP1beta_Cbx1	20..69	CDD:349297	9/56 (16%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..124		15/60 (25%)
		CSD_HP1beta_Cbx1	112..169	CDD:349301	12/52 (23%)
HP1D3csd	NP_573358.1	None