DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Runx3 and run

DIOPT Version :9

Sequence 1:NP_062706.2 Gene:Runx3 / 12399 MGIID:102672 Length:423 Species:Mus musculus
Sequence 2:NP_001285501.1 Gene:run / 33059 FlyBaseID:FBgn0003300 Length:510 Species:Drosophila melanogaster


Alignment Length:476 Identity:149/476 - (31%)
Similarity:209/476 - (43%) Gaps:124/476 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse    38 GGGGGKMGENSGALSAQATAGPGGRTR-PEVRSMVDVLA-------DHAGELVRTDSPNFLCSVL 94
            |.....:..|:.:.|:.||..|....: |.  ||.|:.|       ::.|||.:|.||:.|||.|
  Fly    69 GSSTPDLSTNNTSSSSNATTSPQNSAKMPS--SMTDMFASLHEMLQEYHGELAQTGSPSILCSAL 131

Mouse    95 PSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRS 159
            |:|||.||:||.||||:||.||||||:|::..||||||..||||.:..||||||:||||||||||
  Fly   132 PNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYCGELRNCTTTMKNQVAKFNDLRFVGRS 196

Mouse   160 GRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ-------------------KIEDQ 205
            |||||||||||:.|.|.|:|:|.:|||||||||||||..:.                   .....
  Fly   197 GRGKSFTLTITIATYPVQIASYSKAIKVTVDGPREPRSKQSYGYPHPGAFNPFMLNPAWLDAAYM 261

Mouse   206 TKAFPDRFGD--------------LRMRVTPSTPSPRGSLSTTSHFSSQAQTPIQ---------- 246
            |..:.|.|..              .:...:..:|:|..|::|:   ||.|..|.:          
  Fly   262 TYGYADYFRHQAAAQAAQVHHPALAKSSASSVSPNPNPSVATS---SSSAVQPSEYPHPAAAVAA 323

Mouse   247 -------------GSSDLNPFSDPRQFDRSFPTLQSLTESRFPDPRMHYPGAMSAAFPYSATPSG 298
                         |::...|::.|                :||...:....|..||.|::..|..
  Fly   324 AAGQPAAMMPSPPGAAPATPYAIP----------------QFPFNHVAAAAAAKAATPHAFHPYN 372

Mouse   299 TSLGSLSVAGMPA-SSRFHHTYLPPPYPGAPQSQSGPFQANPAPYHLFY----GASSGSYQFSMA 358
            .:    :.||:.| ::..||.  ..|...:|.| |.|..::|...|:..    ...:.|.....|
  Fly   373 FA----AAAGLRARNAALHHQ--SEPVHVSPAS-SRPSSSSPTQQHVLLKLNTSIETSSIHEQSA 430

Mouse   359 AAGGGER------------------SPTRMLTSCPSGASVSAGNLMNPSLGQADGVEADGSHSNS 405
            :.|..:.                  :|.||  .|    .:.|.:.|.|...::.......|...|
  Fly   431 SDGDSDDEQIDVVKSEFDLDKSLDVAPLRM--RC----DLKAPSAMKPLYHESGPGAVANSRQPS 489

Mouse   406 P---TALSTPGRMDEAVWRPY 423
            |   |.:.:.....:.|||||
  Fly   490 PETTTKIKSAAVQQKTVWRPY 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Runx3NP_062706.2 Runt 77..198 CDD:279225 86/120 (72%)
RunxI 328..423 CDD:285676 23/119 (19%)
runNP_001285501.1 Runt 114..235 CDD:279225 86/120 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832159
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.890

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