DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Runx3 and lz

DIOPT Version :9

Sequence 1:NP_062706.2 Gene:Runx3 / 12399 MGIID:102672 Length:423 Species:Mus musculus
Sequence 2:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster


Alignment Length:544 Identity:164/544 - (30%)
Similarity:212/544 - (38%) Gaps:201/544 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 YTPTFIRDPSTS-------------RRFTPPSTAFPCGGGGGG---------------------- 42
            :.|..:...|||             :..|..:||  .|||.||                      
  Fly   151 HPPAMVTSSSTSPTGNGWSSSTGDFKGITAVATA--TGGGVGGATQGATASTGATAAEVLAVSSS 213

Mouse    43 -KMGENS---GALSAQATAGPGGRTRPEVRSMV---------------------DVL-------- 74
             .:|.:|   ||.:..|.:|..|.|.....|..                     |:|        
  Fly   214 ASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNAVHQDLLWMERLVQK 278

Mouse    75 --ADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELR 137
              .:|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..||||
  Fly   279 RQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELR 343

Mouse   138 NASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRR----- 197
            |.:..|||.||:||||||||||||||||||||||.|:|.|||||.:|||||||||||||.     
  Fly   344 NFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPT 408

Mouse   198 ---HRQKIEDQTKAFPDRFGDLR--------------MRVTPSTPSPRGSLSTTSHFSSQAQ--- 242
               |.:.:....:.:.|.|...:              ..||.:..:...:.|..:..::.|.   
  Fly   409 GGPHYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVA 473

Mouse   243 -TPIQGSSDL------------------NPFSDPRQFDRSFPTLQSLTESRFPDPRMHYPGAMSA 288
             ||..|...:                  :.:|.|..      |:.|       |.:::.|.|   
  Fly   474 VTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNS------TINS-------DCQVYKPNA--- 522

Mouse   289 AFPY--SATPSGT---SLGSLSVAGMPASSRFHHTY-------------LPPPYP---GAPQS-- 330
              |:  :|...|.   :.||.|.|.....|..||.:             ||||.|   .||.|  
  Fly   523 --PHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVG 585

Mouse   331 ---------------------------------QSGPFQAN-PAPYHLFYGASSGSYQFSMAAAG 361
                                             ::|.:.|: ||.....:|....:..:..|..|
  Fly   586 VGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGHGFATDPYQTAGYG 650

Mouse   362 GGERSPTRMLTSCPSGASVSAGNL 385
            ||.          ..|.|.|...|
  Fly   651 GGN----------TGGGSASKSEL 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Runx3NP_062706.2 Runt 77..198 CDD:279225 93/128 (73%)
RunxI 328..423 CDD:285676 15/94 (16%)
lzNP_511099.2 Runt 283..404 CDD:279225 93/120 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.870

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