DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Runx1 and lz

DIOPT Version :9

Sequence 1:NP_001104491.1 Gene:Runx1 / 12394 MGIID:99852 Length:465 Species:Mus musculus
Sequence 2:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster


Alignment Length:440 Identity:158/440 - (35%)
Similarity:202/440 - (45%) Gaps:110/440 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse    71 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 135
            :||||||||.:|.||||.||.|||.|||||:|||||||.:|.|||.||:.||||||..|||||.|
  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346

Mouse   136 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR-------- 192
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||:|||||||||.        
  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411

Mouse   193 HRQKLDDQTKPGSLSF--SERLSELEQLRR-------TAMRVSPHHPAPTPNPRASLNHSTAFNP 248
            |.:.|....:|....|  ::.|.|||.|||       |....:....|...|..|:...:.|..|
  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVAVTP 476

Mouse   249 -----------------------------QPQSQM-QDARQIQPSPP------------WSYDQS 271
                                         .|.|.: .|.:..:|:.|            |:...|
  Fly   477 TGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTINSDCQVYKPNAPHIQAAEMMGAGEWTNGSS 541

Mouse   272 YQYLGSITSSSVHP-----------------------ATPISPGRASGMTSLSAELSSRLSTAPD 313
            ........|.:.||                       |.|:|.|  .|....:..:...:.....
  Fly   542 SSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVG--VGGNGATMGMGMGVGVGMG 604

Mouse   314 LTAFG---------DPRQFPT-LPSISDPRMHYPGAFTYSPPVTSGIGIGMSAMSSASRYHTYLP 368
            :..:|         :..|:.. ||::. |.||..| |...|..|:|.|.|.:...|||:...   
  Fly   605 MNHYGGGYDSANSLEAGQYAAHLPAVL-PEMHGHG-FATDPYQTAGYGGGNTGGGSASKSEL--- 664

Mouse   369 PPYPGS-SQAQAGPFQTGSPSYHLYYGASAGSYQFSMVGGERSPPRILPP 417
             .|.|| :||.:..:|      :..||:...:.|:   |.:.:||...||
  Fly   665 -DYGGSYNQAWSNGYQ------NYQYGSCLATAQY---GPQAAPPPQPPP 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Runx1NP_001104491.1 Runt 72..193 CDD:307137 95/128 (74%)
RunxI 375..465 CDD:312115 11/43 (26%)
lzNP_511099.2 Runt 283..404 CDD:279225 95/120 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836814
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.800

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