DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Runx2 and RunxA

DIOPT Version :9

Sequence 1:NP_001139510.1 Gene:Runx2 / 12393 MGIID:99829 Length:528 Species:Mus musculus
Sequence 2:NP_001259747.1 Gene:RunxA / 4379817 FlyBaseID:FBgn0083981 Length:663 Species:Drosophila melanogaster


Alignment Length:589 Identity:195/589 - (33%)
Similarity:243/589 - (41%) Gaps:190/589 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse   107 RTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENY 171
            ||:.:.:.:||.||:||.||.|:|:|||.|||.|||||||||||:||::.|||:|||.|||||||
  Fly    86 RTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENY 150

Mouse   172 SAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRR 236
            .|||||.:||||||||:||||||||||||||||||||||.||||.:|||::||||||||||||| 
  Fly   151 CAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPR- 214

Mouse   237 HRQKLDDSKPSL------------FSDRLSDLGRIPHPSMRVGVPP-------QNPRPSLNSAPS 282
                   ||..|            |..|.......|....|  :||       .|......||.|
  Fly   215 -------SKTMLSLLGQQQQFHFAFGQRPFHFSTDPLSGFR--MPPIGNCQSASNTHWGYGSAAS 270

Mouse   283 PFNP----QGQSQITDPRQAQSSPP------WSYDQ--------------------SYPSYLSQM 317
            .::|    .|.|..|.|..||.:.|      .|.||                    |..|.|.|.
  Fly   271 AYSPYLASSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDCVPMLPDSTASDLDQH 335

Mouse   318 TSPSIHST---------------TPLSST--------------------------RGTGLPAITD 341
            .|..:.||               |.:|||                          .|.|..:|. 
  Fly   336 LSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGASGGGSAGAGTAGGGAGSGGGAGGGAGGNSIL- 399

Mouse   342 VPRRISDDDTATSDFCL-----WPSSLSKKSQA----------------------GASELGPFSD 379
            |||..::   |::::.:     .|.|||..|||                      ||:..|..|:
  Fly   400 VPRYHTN---ASNEYNVHSSQNGPRSLSDSSQAESPVQEDLLTTNTPNLGSTAGGGAANGGAGSN 461

Mouse   380 PRQFPSISSL-----TESRFSNPRM-----HYP---------ATFTY---TPPVTSGMSLGMSAT 422
            .....:.|..     ..|...||.|     ::|         |...|   |..|..|.....:|.
  Fly   462 AGSGAAGSGAGGAGGASSAVGNPAMLGANQNFPGIVNQAQHSAASAYGGGTGVVGGGHGSAAAAA 526

Mouse   423 THYHTYLPPPYPGS----------SQSQSGPFQTSSTPYLYYGTSSASYQFP------------- 464
            ...:..|.|..|.|          :||..| |.:.:.|......||...:..             
  Fly   527 AGCNGSLYPVLPASLLYSQLYTAANQSAHG-FHSHTLPAHASPNSSVHGELQSVMDHISNVGVRQ 590

Mouse   465 ----MVPGGDRSPSRMVPPCTTTSN-GSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESV 524
                |..||...|..:    |...| |:::.|....|.|..|.|..:|.......::.|    ||
  Fly   591 QHNIMAGGGVTHPGDL----TLIGNCGASVRNIEDGNSNRQVAALAAHRGHHNPTDNGG----SV 647

Mouse   525 WRPY 528
            ||||
  Fly   648 WRPY 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Runx2NP_001139510.1 Runt 116..237 CDD:279225 97/120 (81%)
RunxI 437..528 CDD:285676 25/108 (23%)
RunxANP_001259747.1 Runt 95..216 CDD:279225 97/128 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2765
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - mtm8706
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.960

Return to query results.
Submit another query.