DRSC/TRiP Functional Genomics Resources

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Protein Alignment Runx2 and lz

DIOPT Version :9

Sequence 1:NP_001139510.1 Gene:Runx2 / 12393 MGIID:99829 Length:528 Species:Mus musculus
Sequence 2:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster


Alignment Length:472 Identity:148/472 - (31%)
Similarity:202/472 - (42%) Gaps:156/472 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse   115 DHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNAS 179
            :||.|||||.:|.||||.||:|||.|||||:|||||||.||.|||.||:.||||||..|||||.:
  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346

Mouse   180 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDDS 244
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||||||||||||         
  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPR--------- 402

Mouse   245 KPSLFSDRLSDLGRIPHPSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQSSPPWSYDQS 309
                  .:.|..|...:.::.:|     .||.::..||   .:...::...|::           
  Fly   403 ------SKTSPTGGPHYRALGLG-----QRPYIDGFPS---TKALHELESLRRS----------- 442

Mouse   310 YPSYLSQMTSPSIHSTTPLSSTR---------------------------GTGLPAITDVPRRIS 347
              :.::.:|:.:..:.|..|:..                           |.|...:..:....|
  Fly   443 --AKVAAVTTAAAAAATAASAANAVAAAAAAVAVTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYS 505

Mouse   348 D-DDTATSDFCLW-PSS--LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPAT---- 404
            . :.|..||..:: |::  :......||.|         :.:.||.:.:.:.:...|:|..    
  Fly   506 SPNSTINSDCQVYKPNAPHIQAAEMMGAGE---------WTNGSSSSAAAYYHSHAHHPHAHHAH 561

Mouse   405 ------FTYTPP-----------------VTSGMSLGM--------------SATT--------- 423
                  ....||                 .|.||.:|:              ||.:         
  Fly   562 AHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAAH 626

Mouse   424 --------HYHTYLPPPYP----------GSSQSQS-----GPF-QTSSTPY--LYYGTSSASYQ 462
                    |.|.:...||.          |.|.|:|     |.: |..|..|  ..||:..|:.|
  Fly   627 LPAVLPEMHGHGFATDPYQTAGYGGGNTGGGSASKSELDYGGSYNQAWSNGYQNYQYGSCLATAQ 691

Mouse   463 FPMVPGGDRSPSRMVPP 479
            :    |...:|....||
  Fly   692 Y----GPQAAPPPQPPP 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Runx2NP_001139510.1 Runt 116..237 CDD:279225 95/120 (79%)
RunxI 437..528 CDD:285676 15/51 (29%)
lzNP_511099.2 Runt 283..404 CDD:279225 95/135 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5786
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.820

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