DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctnna1 and Sry-alpha

DIOPT Version :10

Sequence 1:NP_033948.1 Gene:Ctnna1 / 12385 MGIID:88274 Length:906 Species:Mus musculus
Sequence 2:NP_524580.1 Gene:Sry-alpha / 43571 FlyBaseID:FBgn0003510 Length:530 Species:Drosophila melanogaster


Alignment Length:568 Identity:112/568 - (19%)
Similarity:208/568 - (36%) Gaps:168/568 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse   224 ASQACLQHPDVAAYKANRDL--IYKQLQQAVTGISNAAQATASDDAAQHQGGSGGELAYALNNFD 286
            ||....:.|:||...||.|:  |:..|.|.||.|:: .:.|.|.:|.               :..
  Fly    39 ASDLKARLPEVAPSGANLDVETIFLCLTQVVTCITH-LERTISMEAP---------------HMT 87

Mouse   287 KQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTR---------DDRRERIVAECN---- 338
            :|..:|.|.:...|...||.: ||..::....:.|.|...         ||..|::..:.|    
  Fly    88 RQHFLDRLDWCLRRLLVSLTQ-LEGNVTPVKNLEDHSFVELMDLALDHLDDYMEKLAQQRNNSLH 151

Mouse   339 -------------------AVRQAL------------------QDLLSEYMGNAGRKERSDALNS 366
                               .||.||                  :.||:|.   |...|.:...||
  Fly   152 ILEESFTEDTYQLASIVNHIVRHALAFANVAIHSDKKALTALCETLLAEC---ATFHEEAGEPNS 213

Mouse   367 AIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVL------------IEAAKNGNEKE---V 416
            ...|:  :...|.|.|      :..:|||  |..||.|            :|..|:..:::   .
  Fly   214 GHRKL--EALSLERAL------YALESFL--NEALLHLLFVSLIDLENASVEKLKDALQRDPAGA 268

Mouse   417 KEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQ 481
            :|....|..:.:::.::..||.:.|.:.:...:||...:.||:|...:: .||.|   |:|..:.
  Fly   269 QELISAFDTNMDRIQQIGVLAIAFSQDIKTKTIVRSCLASLESLDACIV-PALQL---PESTSSA 329

Mouse   482 ENMDLFKEQWEKQV----RVLTDAVDDITSIDDFL-AVSENHILEDVNKCVIALQEKDVDGLDRT 541
            .:.::.:|.:.:::    .|:.:.:|..:.|:::| .:.|...::|.:...:.:|          
  Fly   330 HHAEVLQEHFNQELLIFRNVIHEIIDSCSLINNYLDMLGERIHVQDKSHLKLIVQ---------- 384

Mouse   542 AGAIRGRAARVIHVVTSEMDNYE-PGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQP 605
                ||...         :|::. |..|:....:..::..:.::  ...:.:|.|..     ..|
  Fly   385 ----RGGVV---------VDHFRLPVNYSGLSEDGKRVHKDLIL--ILRECQAVVNL-----DVP 429

Mouse   606 MDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDS--------DFETEDFDVRSRTSVQTEDDQ 662
            :|....:...:::|..:..:|.  |:.|...|.|.|        ...|..| |||..|.      
  Fly   430 VDPKRIVKRLKILYSVLAKLRD--LICRDNLEPDSSVASEAQVPSSATRTF-VRSSRSF------ 485

Mouse   663 LIAGQSARAIMAQL-------PQEQKAKIA---EQVASFQ-EEKSKLD 699
               |:..|:.:.|.       ||:..|:..   ..:.||| .|..:||
  Fly   486 ---GKRHRSFVKQTGNCSVFGPQDSLAESGHSESDLISFQITEILRLD 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctnna1NP_033948.1 Involved in homodimerization. /evidence=ECO:0000250 2..228 2/3 (67%)
Vinculin 19..867 CDD:460040 112/568 (20%)
Interaction with JUP and CTNNB1. /evidence=ECO:0000250 97..148
Interaction with alpha-actinin. /evidence=ECO:0000250 325..394 19/118 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 864..894
Sry-alphaNP_524580.1 Serendipity_A 1..530 CDD:368466 110/566 (19%)
Blue background indicates that the domain is not in the aligned region.

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