DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctnna1 and Spt

DIOPT Version :10

Sequence 1:NP_033948.1 Gene:Ctnna1 / 12385 MGIID:88274 Length:906 Species:Mus musculus
Sequence 2:NP_610423.3 Gene:Spt / 35889 FlyBaseID:FBgn0033348 Length:591 Species:Drosophila melanogaster


Alignment Length:494 Identity:90/494 - (18%)
Similarity:197/494 - (39%) Gaps:105/494 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse   287 KQIIVDPLSFSEERFRPSLEERLESIISGAAL-MADSSCTRDDRR-----ERIVAECNAVRQALQ 345
            |:::  |||   ::.|.:::     :|.|.:| .|:.:.::|.|.     ::::.||||.::..:
  Fly   151 KEVL--PLS---QKLRANID-----LILGQSLGFANVALSQDKRALSALCQKVIRECNAFQEECK 205

Mouse   346 DLLS-EYMGNAGRKERSDALNSAIDKMTKKTRD-LRRQLRKAVMDHVSDSFLETNVPLLVLIEAA 408
            :..| .|:...  |.|:..:..||.::.....| |.|.:....:|     |.:.:|..:..:...
  Fly   206 ESFSANYLSTL--KLRAMTMEQAIYQLEDFINDALLRLVFTCFLD-----FEKFSVDKIRALLRN 263

Mouse   409 KNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAA 473
            ...|:....|:...|..:.::..::...|.|.:.|.:...::|...:..|:|...:|.:..|..:
  Fly   264 SPDNDDLADEFIADFDVNIDRATQIGIFAISFAPNLKMKTIMRSCLASFESLDTTLIPSLQAHGS 328

Mouse   474 KPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHI-----------LEDVNKCV 527
            ...|.:.:::   |.|:..|....|.:.:|....:...|.:..:.|           |||:.:..
  Fly   329 DLHSDILEQH---FNEEVAKFKAALQEIIDSRALVGCCLEILTSGISATEKLFDKQRLEDLVQIS 390

Mouse   528 IALQEK---DVD--GLDRTAGAIRG----------RAARVIHVVTSEMDNYEPGVYTEKVLEATK 577
            :.|.|.   :|:  ||..|...:..          |..:.|.:..|::   ||    :::|:..|
  Fly   391 LLLVEHFQLEVNRKGLSETQDRLGEEYYQQFIRVLRECKAILMCASQV---EP----QRILKRFK 448

Mouse   578 LLSNTVMPRF---------TEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIR 633
            :| .|::.:.         .|::...:..|.:|..:.::|:|      ..:.|.:..|...::..
  Fly   449 IL-RTILRKLHGSLGAGKQEEELPIPLAPLLADDTKGVNEDE------THFTGYKTARSGSILYD 506

Mouse   634 TPE-----ELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQE 693
            |..     ...|:...|...|::|..:  .....::..:|.|.:|.     ::..||        
  Fly   507 TERRNRVTRRTDNKLPTNTLDIKSDKA--KPHGNVLRRESLRTVMF-----KRQNIA-------- 556

Mouse   694 EKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRG 732
            |..||...:|   :...|:     |:..|:.::|..:.|
  Fly   557 ESRKLYTSMS---NQSTDL-----QITDILDQLTGMSNG 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctnna1NP_033948.1 Involved in homodimerization. /evidence=ECO:0000250 2..228
Vinculin 19..867 CDD:460040 90/494 (18%)
Interaction with JUP and CTNNB1. /evidence=ECO:0000250 97..148
Interaction with alpha-actinin. /evidence=ECO:0000250 325..394 16/75 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 864..894
SptNP_610423.3 Serendipity_A 1..468 CDD:368466 64/344 (19%)
Blue background indicates that the domain is not in the aligned region.

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