DRSC/TRiP Functional Genomics Resources

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Protein Alignment Casp6 and Decay

DIOPT Version :9

Sequence 1:NP_033941.3 Gene:Casp6 / 12368 MGIID:1312921 Length:276 Species:Mus musculus
Sequence 2:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster


Alignment Length:317 Identity:98/317 - (30%)
Similarity:141/317 - (44%) Gaps:54/317 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MTETD----GFYKSREVFDPAEQYKMDH-------------------------KRRGVALIFNHE 36
            |.:||    | .|::...|.|:..|:.|                         .|.|:|||.||:
  Fly     1 MDDTDFSLFG-QKNKHKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYENCARAGIALILNHK 64

Mouse    37 RFFWHLTLPERRGTNADRDNLTRRFSDLGFEVKCFNDLRAEELLLKIHEVSTSSHIDADCFICVF 101
            .....   .:|.||..|||::.......||:|:.|:||...|:...:.||:...|...|||:...
  Fly    65 DVKGQ---KQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAV 126

Mouse   102 LSHGEGNHVYAYDAKIEIQTLTGLFKGDKCQSLVGKPKIFIIQACRGSQ-------HDVPVVPLD 159
            :|||....|||.|....::.|...|.||.|::|..|||:|.||||||:.       ....|:..:
  Fly   127 MSHGTEGKVYAKDMSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRE 191

Mouse   160 MVDHQTDKLDNVTQVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEML------ 218
            :|......:..:|       |.:|:.||.|:.||..:.::|.|...:|||:||.||.:|      
  Fly   192 LVPEPAAAVQPIT-------YAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAAN 249

Mouse   219 -ARYGSSLEFTELLTLVNRKVSQRRVDFCKDPDAIGKKQVPCFASMLTKKLHFCPKP 274
             |.....:|...|||.|||||:.......|:......|::|.|.|.|||......||
  Fly   250 EAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTFQLRVKP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Casp6NP_033941.3 CASc 20..272 CDD:214521 89/290 (31%)
DecayNP_477462.1 CASc 54..302 CDD:237997 87/257 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842778
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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