DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Casp3 and Dcp-1

DIOPT Version :9

Sequence 1:NP_001271338.1 Gene:Casp3 / 12367 MGIID:107739 Length:277 Species:Mus musculus
Sequence 2:NP_476974.1 Gene:Dcp-1 / 37729 FlyBaseID:FBgn0010501 Length:323 Species:Drosophila melanogaster


Alignment Length:247 Identity:101/247 - (40%)
Similarity:145/247 - (58%) Gaps:8/247 - (3%)


- Green bases have known domain annotations that are detailed below.


Mouse    35 SSYKMDYPEMGICIIINNKNFHKSTGMSSRSGTDVDAANLRETFMGLKYQVRNKNDLTREDILEL 99
            |.|.|.:...|:.:|.|:: |.....:.||:||:|||..|::.|..|.:.|....|....|||:.
  Fly    69 SEYNMSHKHRGVALIFNHE-FFDIPSLKSRTGTNVDAQELKKAFENLGFAVSVHKDCKLRDILKH 132

Mouse   100 MDSVSKEDHSKRSSFVCVILSHGDEGVIYGTNGPVELKKLTSFFRGDYCRSLTGKPKLFIIQACR 164
            :...::.||:........|||||:.|.:|..:...:|..:..:|...:|.||.||||||.||||:
  Fly   133 VGKAAELDHTDNDCLAVAILSHGEHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQ 197

Mouse   165 GTELDCGIETDSG---TD-EEMACQKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCSMLKL 225
            |..||.||..:.|   || |.....|||:.||||::|||.|||:||||..:|||::|||...|..
  Fly   198 GDRLDGGITLEKGVTETDGESSTSYKIPIHADFLFSYSTIPGYFSWRNINNGSWYMQSLIRELNA 262

Mouse   226 YAHKLEFMHILTRVNRKVATEFESFSLDST--FHAKKQIPCIVSMLTKELYF 275
            ...|.:.:.:||.||::||.:||| ::.:|  ...:|||||:.||||:.|.|
  Fly   263 NGKKYDLLTLLTFVNQRVALDFES-NVPATPMMDRQKQIPCLTSMLTRILRF 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Casp3NP_001271338.1 CASc 37..277 CDD:214521 100/245 (41%)
Dcp-1NP_476974.1 CASc 71..313 CDD:214521 99/243 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836969
Domainoid 1 1.000 202 1.000 Domainoid score I2975
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3679
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D417543at33208
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 1 1.000 - - mtm8756
orthoMCL 1 0.900 - - OOG6_103710
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3066
SonicParanoid 1 1.000 - - X460
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.690

Return to query results.
Submit another query.