DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCR5 and AstA-R1

DIOPT Version :10

Sequence 1:NP_000570.1 Gene:CCR5 / 1234 HGNCID:1606 Length:352 Species:Homo sapiens
Sequence 2:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster


Alignment Length:323 Identity:81/323 - (25%)
Similarity:161/323 - (49%) Gaps:38/323 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    13 NY-YTSE---------------PCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKRL 61
            || :|||               ..:.:.:::|.:.::|..:.::...|.:||.||||:::..:::
  Fly    41 NYAFTSEHTDHSDHNANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQM 105

Human    62 KSMTDIYLLNLAISD-LFFLLTVPFWA-HYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTI 124
            :|.|::.::|||:|| ||.:..|||.| .|...:|.|||..|:.:..:..:.....::.::|::.
  Fly   106 RSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSF 170

Human   125 DRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSSHFPYS-QYQ 188
            ||:|||||.|.::..||.....:..:..|:..|..::|..:....:....|....:...:| :.:
  Fly   171 DRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEE 235

Human   189 FWK--NFQTLKIVILGLVLPLLVMVICYSGILKTLLR----CR----NEKKRHRAVRLIFTIMIV 243
            .|.  .|| :...:...|.||.::...|.|:|..|.:    |:    :.|.:.|..|::..:::.
  Fly   236 IWSLVGFQ-VSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLA 299

Human   244 YFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQ-VTETLGMTHCCINPIIYAFVGEKFR 305
            :.:.|.|.:::|:|...       |....:.|...:| ::..:..|:.|||||:|||:.:.||
  Fly   300 FAICWLPIHVILVLKAL-------NLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFR 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCR5NP_000570.1 7tmA_CCR5_CCR2 31..308 CDD:341338 75/289 (26%)
TM helix 1 31..58 CDD:341338 8/26 (31%)
TM helix 2 65..90 CDD:341338 12/26 (46%)
TM helix 3 101..131 CDD:341338 6/29 (21%)
TM helix 4 143..165 CDD:341338 3/21 (14%)
TM helix 5 191..220 CDD:341338 8/30 (27%)
TM helix 6 228..258 CDD:341338 6/29 (21%)
TM helix 7 276..301 CDD:341338 10/25 (40%)
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 75/289 (26%)
TM helix 1 76..102 CDD:320224 8/25 (32%)
TM helix 2 109..135 CDD:320224 12/25 (48%)
TM helix 3 147..177 CDD:320224 6/29 (21%)
TM helix 4 189..209 CDD:320224 2/19 (11%)
TM helix 5 239..268 CDD:320224 8/29 (28%)
TM helix 6 284..314 CDD:320224 6/29 (21%)
TM helix 7 326..351 CDD:320224 10/24 (42%)

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