DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCR5 and AstA-R2

DIOPT Version :10

Sequence 1:NP_000570.1 Gene:CCR5 / 1234 HGNCID:1606 Length:352 Species:Homo sapiens
Sequence 2:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster


Alignment Length:363 Identity:102/363 - (28%)
Similarity:173/363 - (47%) Gaps:60/363 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    13 NYYTSEPCQKINVKQIAARLLPPL----YSLVFIFGFVGNMLVILILINCKRLKSMTDIYLLNLA 73
            :::|.|....||      ..||.:    :.::.|.||.||:||||:::....::|.|::.::|||
  Fly    23 SFFTDEEWLAIN------GTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLA 81

Human    74 ISDLFF-LLTVPFWA-HYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFA 136
            .:||.| :|.:||.| .|....|.:|...|:.:..|..:..|:.|:.::|::|||:|||||.:.:
  Fly    82 AADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRS 146

Human   137 LKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSSHFPYSQYQFWKN-------FQ 194
            ...||....::..|..|:|.:..|:| :.||....  :.|....:..|....|..|       :|
  Fly   147 RMMRTENITLIAIVTLWIVVLVVSVP-VAFTHDVV--VDYDAKKNITYGMCTFTTNDFLGPRTYQ 208

Human   195 TLKIVILGLVLPLLVMVICYSGILKTLLR--------CRNEKKRHRAVRLIFTIMIVYFLFWAPY 251
             :...|...:|||:::...|..::..|.|        ..:::.|.|..||:..::|.:...|.|.
  Fly   209 -VTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPV 272

Human   252 NIVLLLNTFQEFFGLNNCSSSNRLDQ-AMQVT-ETLGMTHCCINPIIYAFVGEKFRNYLLVFFQK 314
            .::|||.:.       :...:|.|.: .:||| :||..:..||||::|||:.|.||         
  Fly   273 QLILLLKSL-------DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFR--------- 321

Human   315 HIAKRFCK---CCSIFQQ-----EAPERASSVYTRSTG 344
               |.|.|   |.|.:|.     ..|.:.|...|.:||
  Fly   322 ---KAFYKAVNCSSRYQNYTSDLPPPRKTSCARTSTTG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCR5NP_000570.1 7tmA_CCR5_CCR2 31..308 CDD:341338 87/299 (29%)
TM helix 1 31..58 CDD:341338 11/30 (37%)
TM helix 2 65..90 CDD:341338 11/26 (42%)
TM helix 3 101..131 CDD:341338 10/29 (34%)
TM helix 4 143..165 CDD:341338 5/21 (24%)
TM helix 5 191..220 CDD:341338 7/35 (20%)
TM helix 6 228..258 CDD:341338 9/29 (31%)
TM helix 7 276..301 CDD:341338 12/26 (46%)
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 86/307 (28%)
TM helix 1 40..66 CDD:320224 9/25 (36%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 5/20 (25%)
TM helix 5 204..233 CDD:320224 6/29 (21%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 12/24 (50%)

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