DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Camk4 and lok

DIOPT Version :9

Sequence 1:XP_006525606.1 Gene:Camk4 / 12326 MGIID:88258 Length:497 Species:Mus musculus
Sequence 2:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster


Alignment Length:294 Identity:100/294 - (34%)
Similarity:161/294 - (54%) Gaps:20/294 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    70 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----------DKKIVRTEIGVLLRLSHP 123
            :.|..:||.||..:|.......|.:.:|:|::||.:           |...|..|..::..||||
  Fly   174 YYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHP 238

Mouse   124 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 188
            .::::.:|.:.|..:.:|||.:.||:|.:||:.....||..:.....|:..||.|||:.||.|||
  Fly   239 CVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDRGITHRD 303

Mouse   189 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEIL-RGC--AYGPEVDMWS 250
            |||:|:|..|...:..||::||||||.|:...:|:|:||||.|.|||:| .|.  ||..:||:||
  Fly   304 LKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWS 368

Mouse   251 VGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKKRLTT 315
            :|::.:..|.|..||.||.|.. ..::|....:.:..|.|..||..||.|:.:::::||::|.:.
  Fly   369 LGVVLFTCLSGTLPFSDEYGTP-AAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSI 432

Mouse   316 FQALQHPWVTG-----KAANFVHMDTAQKKLQEF 344
            ...||..|:..     ||...:.:|..:.:.:.|
  Fly   433 DDVLQSSWLRDAPMLQKAKRLMKLDGMEIEEENF 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Camk4XP_006525606.1 STKc_CaMKIV 66..359 CDD:270987 100/294 (34%)
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 95/267 (36%)
S_TKc 174..441 CDD:214567 95/267 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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