DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calb2 and Cam

DIOPT Version :9

Sequence 1:NP_031612.1 Gene:Calb2 / 12308 MGIID:101914 Length:271 Species:Mus musculus
Sequence 2:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster


Alignment Length:169 Identity:43/169 - (25%)
Similarity:78/169 - (46%) Gaps:28/169 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 LAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGE-KMKEFMQKYD 76
            |.|...::|.|.:..||.||:|.|..|||            |:.|.|...|..| ::::.:.:.|
  Fly     5 LTEEQIAEFKEAFSLFDKDGDGTITTKEL------------GTVMRSLGQNPTEAELQDMINEVD 57

Mouse    77 KNSDGKIEMAELAQILPTEENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLK 141
            .:.:|.|:..|...::..:       .:...|..|..||:|.:|.|.:|:|.|.||:..:::|.:
  Fly    58 ADGNGTIDFPEFLTMMARK-------MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115

Mouse   142 KANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLL 180
            |..        .|....::|..|::|||::...|...::
  Fly   116 KLT--------DEEVDEMIREADIDGDGQVNYEEFVTMM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Calb2NP_031612.1 EFh_HEF_CR 21..268 CDD:320077 41/161 (25%)
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 43/169 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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