DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr1 and smal

DIOPT Version :9

Sequence 1:NP_001185760.1 Gene:Ddr1 / 12305 MGIID:99216 Length:911 Species:Mus musculus
Sequence 2:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster


Alignment Length:711 Identity:195/711 - (27%)
Similarity:292/711 - (41%) Gaps:178/711 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 SLLLLLLLVTIG----DADMKGHFDPAKCRYALGMQDRTIPDSDISVSSSWSDS-TAARHSRLES 67
            :|.|..|::..|    :|.....||.|.|...|||:...|.|:.|:.||:...: ...:|:||::
  Fly    50 TLCLWTLVIASGCLMLNAPTTMAFDIATCNVPLGMESLLITDAQITASSAHDMAFVGPQHARLKT 114

Mouse    68 SDGDGAWCPAGPVFPKEEEYLQVDLRRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDG-RRWM 131
            .:..|||||...|....:|||||||.:.|::..:.||||:..|.|:|::.:|.|.|.|.| .:|.
  Fly   115 DNDGGAWCPKHMVSNALKEYLQVDLLQTHVITAIRTQGRYGKGQGQEYTEAYVLEYWRPGFDKWQ 179

Mouse   132 DWKDRWGQEVISGNEDPGGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRDGLLSYT 196
            .||:..|:|::.||.:....|...|.|.:.|..:|.||......:||||.|:.||.|.:|::||:
  Fly   180 RWKNIQGKEILPGNINTYSEVENALQPIIFASKIRIYPYGQYDRTVCLRAEIVGCPWEEGIVSYS 244

Mouse   197 APVGQTMQLSEVMVHLNDSTYDGYTAGGLQYGGLGQLADGVVGLDDFRQSQELRVWPGYDYVGWS 261
            .|.|....:.   |.|:|.||||...|.....|||||.||..|.|:||.... ....||:::||.
  Fly   245 IPKGVQRGME---VDLSDKTYDGNEQGDRYVDGLGQLVDGQKGKDNFRTDIH-GFGKGYEWIGWR 305

Mouse   262 NQSFPTGY----VEMEFEFDRLRTFQTMQVHCNNMHTLGARLPGGVECRFKRGPAMAWEGEPVRH 322
            |.:  .|.    ||:.||||.:|.|..:.:|.|||.|...::....:..|..| ...:.||||:.
  Fly   306 NDT--PGLLGKPVEIVFEFDTVRNFSAIVLHTNNMFTKDVQVFVHAKVFFSIG-GRYFSGEPVQF 367

Mouse   323 ALGGSLGDPRARAISVPLGGHVGRFLQCRFLFAGPWLLFSEISFISDVVNDSSDTFPPAPWWPPG 387
            :.........||.:::.|...||::|:....||..|::.|||||||                  .
  Fly   368 SYMPDTIMDHARDVTIKLHHRVGKYLKINLYFAVKWIMLSEISFIS------------------V 414

Mouse   388 PPPTNFSSLELEPRGQQP-----------------------------------VAKAEG------ 411
            |...||:. |.|.|...|                                   ||.|.|      
  Fly   415 PAMGNFTD-EQEQRSNSPSQAQDVHDETNGSEYQANRNKPNGVGGSAGGLGEGVAAAGGDIVGNN 478

Mouse   412 ---------SPTAI--------LIGCLVAII-LLLLLIIALMLWRLHWRRLLSKAER----RVLE 454
                     :|..|        .||.::.:: .:::|::|::|:      ::|:.:|    .||:
  Fly   479 KYNNGPQLIAPRPIDQEPNDANFIGVVIVVLTTIIILLVAIILF------IVSRTKRARGSNVLD 537

Mouse   455 EELTVHLSVPGDTI---LINNRPGPR-------------EPPPYQEPRPRGTPPHSAPCVPNGSA 503
               ....|...:|:   :..:||...             :...|.||    ...:...|..||.|
  Fly   538 ---AFQYSFNPNTLGGNVDKHRPNGNSIKANVDDNDSIGKNSLYHEP----FNVNMYTCGVNGYA 595

Mouse   504 LLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQACSGDYMEPEK--PGAP---------LLP 557
            .:  |.....:...|...|.|      .:|.| :.|    |||...|  .|||         ..|
  Fly   596 AV--NDLQCNMTPDYTDVPEG------GYAVP-HMQ----DYMPSSKMGGGAPGGGGYVNVRRTP 647

Mouse   558 PPPQNSV-PHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEG 617
            |||.:|: |.                   .|.:||      ||...:..:...||...|.|
  Fly   648 PPPLSSIFPR-------------------PPTVPP------PPMEKYYATTAIFKPLKGPG 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddr1NP_001185760.1 FA58C 58..185 CDD:238014 48/127 (38%)
DS-like domain. /evidence=ECO:0000250 193..369 63/179 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..496 5/43 (12%)
PPxY motif 479..482 0/2 (0%)
PKc_like 602..905 CDD:419665 4/16 (25%)
smalNP_723165.2 FA58C 78..234 CDD:214572 57/155 (37%)
FA58C 81..233 CDD:238014 56/151 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I6997
eggNOG 1 0.900 - - E1_KOG1094
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 527 1.000 Inparanoid score I1219
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122892at33208
OrthoFinder 1 1.000 - - FOG0001292
OrthoInspector 1 1.000 - - mtm8799
orthoMCL 1 0.900 - - OOG6_103661
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X998
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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