DRSC/TRiP Functional Genomics Resources

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Protein Alignment PLIN2 and ssq-1

DIOPT Version :10

Sequence 1:XP_016869748.1 Gene:PLIN2 / 123 HGNCID:248 Length:445 Species:Homo sapiens
Sequence 2:NP_501768.1 Gene:ssq-1 / 177835 WormBaseID:WBGene00006050 Length:290 Species:Caenorhabditis elegans


Alignment Length:64 Identity:22/64 - (34%)
Similarity:29/64 - (45%) Gaps:12/64 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   106 ANAKGAVTGA-KDAVTTTVTGAKDSVASTITGV---------MDKTKGAVTGSVEKTKSVVSGS 159
            |:...||.|| :.|.|.|..|...:.|||:|.|         |....||.||:  .|.:.|.|:
 Worm   107 ASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGGAPRGASTMTAVGGAPTGA--STMTAVGGA 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PLIN2XP_016869748.1 Perilipin 5..406 CDD:460784 22/64 (34%)
ssq-1NP_501768.1 None

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