Protein Alignment PLIN2 and ssq-2

DIOPT Version :10

• Sequence 1: XP_016869748.1
• Gene: PLIN2 / 123
• HGNCID: 248
• Length: 445
• Species: Homo sapiens
• Sequence 2: NP_500698.1
• Gene: ssq-2 / 177265
• WormBaseID: WBGene00006051
• Length: 405
• Species: Caenorhabditis elegans
• Alignment Length: 182
• Identity: 47/182 - (25%)
• Similarity: 61/182 - (33%)
• Gaps: 64/182 - (35%)

Human     1 MASVAVDPQ-PSVVTRVVNLPLVSSTYDLMSSAYLSTKDQYPYLKSVCEMAENGVKTITSV--AM 62
            |.:|...|: .|.:|.|..:|..:||...:..                  |..|..|:|:|  |.
 Worm   110 MTAVGGAPRGASTMTAVGGVPSGASTMTAVGG------------------APTGASTMTAVGGAP 156

Human    63 TSALPIIQKLEPQIAVANTYACKGLDRIEERLPILNQPSTQIVANAKGAVTGAKDAVTTTVTGAK 127
            |.|.|:     .....|.|.|                 ||.....  ||.|||.   |.|..|..
 Worm   157 TGASPM-----TAFGGAPTGA-----------------STMTAVG--GAPTGAS---TMTAVGGA 194

Human   128 DSVASTITGV---------MDKTKGAVTGSVEKTKSVVSG-----SINTVLG 165
            .:.|||:|.|         |....||.||:  .|.:.|.|     |..|.:|
 Worm   195 PTGASTMTAVGGAPTGASTMTAVGGAPTGA--STMTAVGGVPTGASTMTAIG 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PLIN2	XP_016869748.1	Perilipin	5..406	CDD:460784	45/178 (25%)
ssq-2	NP_500698.1	PPE	<72..290	CDD:444372	47/182 (26%)