Sequence 1: | XP_006497689.1 | Gene: | Cacna1b / 12287 | MGIID: | 88296 | Length: | 2351 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
Alignment Length: | 2877 | Identity: | 635/2877 - (22%) |
---|---|---|---|
Similarity: | 1066/2877 - (37%) | Gaps: | 889/2877 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 44 LYKQS---IAQRARTMALYNPIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATI 105
Mouse 106 IANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMD 170
Mouse 171 FVVVLTGILATAGTDF-DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAI 234
Mouse 235 LMFAIIGLEFYMGKFHKAC------------------FPNSTDT--EPVGDFP--CGKDPPARQC 277
Mouse 278 DGDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIII 342
Mouse 343 GSFFMLNLVLGVLSGEFAKERE--RVENRRAFLKLRRQQQIE--------RELN-GYLEWIFKAE 396
Mouse 397 EVMLAE----------------------------EDKNAEEKSPLDAVLKR-AATKK-------- 424
Mouse 425 --------------------SRNDLIHAEEGEDRFVD--------------------LCAVGSPF 449
Mouse 450 ARASLKSGKTESSS--------------------------------------------------- 463
Mouse 464 YFRRKE-----------------------------KMFRFFIRRMVKAQSFYWVVLCVVALNTLC 499
Mouse 500 VAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVW 564
Mouse 565 AAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGM 629
Mouse 630 QLFGGQFNFQ----DETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYF 690
Mouse 691 IVLTL-FGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKE------------- 741
Mouse 742 -----------VAEVSPMSAANISIAAFVKQTRG----------------------TVSRS---- 769
Mouse 770 ------------------------------------------------------SSVSSVN---- 776
Mouse 777 ----SPRQQNSAKARSVWEQRASQLRLQNLRASCEALYSE------------MDP---EER---- 818
Mouse 819 -------------LRYASTRHVR-------------PDMKTHMDR-------------------- 837
Mouse 838 -----------------PLVVEPG--RDGL---------------------------------RG 850
Mouse 851 PVGSKSKPEGTEATESADLP-------------RRHHRHRDRDKTSATAPAGGEQDRTESTE--- 899
Mouse 900 ---TGAREERAR------------------PRRSHSKETPGADTQVRCERSRRHHRRGSPEE-AT 942
Mouse 943 EREPRRHRAHRHAQDSSKEGTAPVLVPKGERRARHRGPRTGPREAENNEEPTRRHRARHKVPP-- 1005
Mouse 1006 -------TLQPPER--EAAEKE----SNAVEGDKETRN--HQPKEPHCDLEAIAVT--------- 1046
Mouse 1047 ----GVG---PLHMLPSTCLQKVDEQPEDA---------------DNQR--NVTRMGSQPSDPST 1087
Mouse 1088 TVHVPVTLTGPPGETPVV--PSGNMN---------LEGQAEGKKEAEA----------------- 1124
Mouse 1125 -------------------------DDVLRRG----------PRPIVPYSS-------------- 1140
Mouse 1141 ------------MFCLSPTNL-----LRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDS 1188
Mouse 1189 FRNNALK----YMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSS 1249
Mouse 1250 FMGGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVI 1314
Mouse 1315 AVQLFKGKFFYCTDESKEL--------ERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALL 1371
Mouse 1372 TLFTVSTGEGWPMVLKHSVDATYEEQGPSPGFRMELSIFYVVYFVVF----PFFFVNIFVALIII 1432
Mouse 1433 TF---QEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNK-----QSFQYKTWTFVVSPPFE 1489
Mouse 1490 YFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECILKIIAFGVLNYFRDAWNVFD 1554
Mouse 1555 FVTVLGSITDILVTEIAETNNFINLSF-------LRLFRAARLIKLLRQGYTIRILLWTFVQSFK 1612
Mouse 1613 ALPYVCLLIAMLFFIYAIIGMQVFGNI----ALDDDTSINRHNNFRTFLQALMLLFRSATGEAWH 1673
Mouse 1674 EIMLSCLGNRA-CDP----HANASECGSD-FAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRD 1732
Mouse 1733 SSI-LGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1796
Mouse 1797 ISNEDMTVHFTSTLMALIRTALEIKLAPAGTK--QHQCDAELRKEISSVWANLPQKTLDLLVPPH 1859
Mouse 1860 --KPDEMTVGKVYAALMIFDFYKQNKTTRDQTH--------QAPGG-LSQMGPVSLFHPLKATLE 1913
Mouse 1914 QTQPAVLRGARVFLRQKSATSLSN-------------GGA--------IQTQESGIKESLSWGTQ 1957
Mouse 1958 RT-------------QDA---------LYEARAPLERGHSAEIPVGQSGTLAVDVQMQNMTLRGP 2000
Mouse 2001 ------DGEPQPGLESQGRAASMPRLAAETQPAPNASPMKRSIST-LAPRPHGTQLCS------T 2052
Mouse 2053 VLDRPPPSQASHHHHHRCHRRRDKKQRSLEKGPSLSVDPEGAPSTAAGPGLPHGEGSTACRRDRK 2117
Mouse 2118 QERGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQLMPSLSSHPTS------PTAAL---EPAPH 2173
Mouse 2174 PQG---SGSVN--GSPL 2185 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cacna1b | XP_006497689.1 | Ion_trans | 94..367 | CDD:366146 | 99/297 (33%) |
Ion_trans | 482..721 | CDD:366146 | 69/243 (28%) | ||
Granin | <936..>1041 | CDD:279595 | 27/122 (22%) | ||
Ion_trans | 1161..1395 | CDD:366146 | 80/245 (33%) | ||
Ion_trans | 1485..1734 | CDD:366146 | 93/265 (35%) | ||
GPHH | 1743..1796 | CDD:374878 | 18/52 (35%) | ||
Ca_chan_IQ | 1808..1882 | CDD:370105 | 14/77 (18%) | ||
PHA03307 | 1959..>2326 | CDD:223039 | 55/276 (20%) | ||
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 77/220 (35%) |
Ion_trans | 705..902 | CDD:278921 | 56/205 (27%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 85/279 (30%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 9/56 (16%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 86/247 (35%) | ||
GPHH | 2331..2386 | CDD:293510 | 21/60 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |